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2019_SCN_bioreactor_t1_biofilm_scaffold_20984

Search features with annotation key words

Displaying 24 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
2019_SCN_bioreactor_t1_biofilm_scaffold_20984_1
Cellulomonas cellasea, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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2..283
DNA (282bp) protein (94aa)
Proteasome-associated ATPase n=1 Tax=Cellvibrio gilvus (strain ATCC 13127 / NRRL B-14078) RepID=F8A6Z3_CELGA
Vesicle-fusing ATPase
AAA ATPase forming ring-shaped complexes {ECO:0000256|SAAS:SAAS00017598}; TaxID=1408250 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellulomonas cellasea DSM 20118.;"
2019_SCN_bioreactor_t1_biofilm_scaffold_20984_2
unknown

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390..1052
DNA (663bp) protein (221aa)

This feature has no annotations

2019_SCN_bioreactor_t1_biofilm_scaffold_20984_3
Cellulomonas flavigena, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1137..2738
DNA (1602bp) protein (534aa)
Pup deamidase/depupylase n=1 Tax=Cellulomonas sp. JC225 RepID=UPI0003777566
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADG74898.1}; TaxID=446466 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellulomonas flavigena (strain ATCC 482 / DSM 20109 / NCIB 8073 / NRS; 134).;"
2019_SCN_bioreactor_t1_biofilm_scaffold_20984_4
Cellulomonas flavigena, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2812..2997
DNA (186bp) protein (62aa)
Prokaryotic ubiquitin-like protein Pup n=1 Tax=Cellulomonas flavigena (strain ATCC 482 / DSM 20109 / NCIB 8073 / NRS 134) RepID=D5UFA0_CELFN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADG74897.1}; TaxID=446466 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellulomonas flavigena (strain ATCC 482 / DSM 20109 / NCIB 8073 / NRS; 134).;"
2019_SCN_bioreactor_t1_biofilm_scaffold_20984_5
Cellulomonas flavigena, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3005..3862
DNA (858bp) protein (286aa)
Proteasome subunit beta {ECO:0000256|HAMAP-Rule:MF_02113}; EC=3.4.25.1 {ECO:0000256|HAMAP-Rule:MF_02113};; 20S proteasome beta subunit {ECO:0000256|HAMAP-Rule:MF_02113}; Proteasome core protein PrcB {ECO:0000256|HAMAP-Rule:MF_02113}; TaxID=446466 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellulomonas flavigena (strain ATCC 482 / DSM 20109 / NCIB 8073 / NRS; 134).;"
Proteasome subunit beta n=1 Tax=Cellulomonas flavigena (strain ATCC 482 / DSM 20109 / NCIB 8073 / NRS 134) RepID=D5UF99_CELFN
20S proteasome A and B subunits
2019_SCN_bioreactor_t1_biofilm_scaffold_20984_6
Cellulomonas flavigena, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3859..4713
DNA (855bp) protein (285aa)
Proteasome subunit alpha {ECO:0000256|HAMAP-Rule:MF_00289}; EC=3.4.25.1 {ECO:0000256|HAMAP-Rule:MF_00289};; 20S proteasome alpha subunit {ECO:0000256|HAMAP-Rule:MF_00289}; Proteasome core protein PrcA {ECO:0000256|HAMAP-Rule:MF_00289}; TaxID=446466 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellulomonas flavigena (strain ATCC 482 / DSM 20109 / NCIB 8073 / NRS; 134).;"
proteasome subunit alpha n=1 Tax=Cellulomonas sp. JC225 RepID=UPI00031FD4C7
20S proteasome A and B subunits
2019_SCN_bioreactor_t1_biofilm_scaffold_20984_7
Cellulomonas flavigena, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4731..6092
DNA (1362bp) protein (454aa)
Pup--protein ligase {ECO:0000256|HAMAP-Rule:MF_02111, ECO:0000256|SAAS:SAAS00018320}; EC=6.3.2.n2 {ECO:0000256|HAMAP-Rule:MF_02111, ECO:0000256|SAAS:SAAS00018320};; Proteasome accessory factor A {ECO:0000256|HAMAP-Rule:MF_02111}; Pup-conjugating enzyme {ECO:0000256|HAMAP-Rule:MF_02111}; TaxID=446466 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellulomonas flavigena (strain ATCC 482 / DSM 20109 / NCIB 8073 / NRS; 134).;"
Pup--protein ligase n=1 Tax=Cellulomonas flavigena (strain ATCC 482 / DSM 20109 / NCIB 8073 / NRS 134) RepID=D5UF97_CELFN
hypothetical protein
2019_SCN_bioreactor_t1_biofilm_scaffold_20984_8
Cellulomonas fimi, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6157..7032
DNA (876bp) protein (292aa)
Peptidyl-prolyl cis-trans isomerase {ECO:0000256|RuleBase:RU003915, ECO:0000256|RuleBase:RU004231}; EC=5.2.1.8 {ECO:0000256|RuleBase:RU003915};; Flags: Precursor;; TaxID=590998 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellulomonas fimi (strain ATCC 484 / DSM 20113 / JCM 1341 / NBRC 15513; / NCIMB 8980 / NCTC 7547).;"
Peptidyl-prolyl cis-trans isomerase n=1 Tax=Cellulomonas fimi (strain ATCC 484 / DSM 20113 / JCM 1341 / NBRC 15513 / NCIMB 8980 / NCTC 7547) RepID=F4GYD6_CELFA
FKBP-type peptidylprolyl isomerase
2019_SCN_bioreactor_t1_biofilm_scaffold_20984_9
[Cellvibrio] gilvus, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7029..7799
DNA (771bp) protein (257aa)
Imidazole glycerol phosphate synthase subunit HisF {ECO:0000256|HAMAP-Rule:MF_01013}; EC=4.1.3.- {ECO:0000256|HAMAP-Rule:MF_01013};; IGP synthase cyclase subunit {ECO:0000256|HAMAP-Rule:MF_01013}; IGP synthase subunit HisF {ECO:0000256|HAMAP-Rule:MF_01013}; ImGP synthase subunit HisF {ECO:0000256|HAMAP-Rule:MF_01013}; TaxID=593907 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellvibrio gilvus (strain ATCC 13127 / NRRL B-14078).;"
Imidazole glycerol phosphate synthase subunit HisF n=1 Tax=Cellvibrio gilvus (strain ATCC 13127 / NRRL B-14078) RepID=F8A6Y5_CELGA
imidazoleglycerol phosphate synthase, cyclase subunit
2019_SCN_bioreactor_t1_biofilm_scaffold_20984_10
Cellulomonas cellasea, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7871..8254
DNA (384bp) protein (128aa)
Phosphoribosyl-AMP cyclohydrolase {ECO:0000256|HAMAP-Rule:MF_01021, ECO:0000256|SAAS:SAAS00006950}; Short=PRA-CH {ECO:0000256|HAMAP-Rule:MF_01021};; EC=3.5.4.19 {ECO:0000256|HAMAP-Rule:MF_01021, ECO:0000256|SAAS:SAAS00103216};; TaxID=1408250 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellulomonas cellasea DSM 20118.;"
phosphoribosyl-AMP cyclohydrolase (EC:3.5.4.19)
Phosphoribosyl-AMP cyclohydrolase n=1 Tax=Cellulomonas fimi (strain ATCC 484 / DSM 20113 / JCM 1341 / NBRC 15513 / NCIMB 8980 / NCTC 7547) RepID=F4GYE1_CELFA
2019_SCN_bioreactor_t1_biofilm_scaffold_20984_11
Cellulomonas fimi, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8251..9858
DNA (1608bp) protein (536aa)
anthranilate synthase component I (EC:4.1.3.27)
Anthranilate synthase component I {ECO:0000313|EMBL:AEE45931.1}; EC=4.1.3.27 {ECO:0000313|EMBL:AEE45931.1};; TaxID=590998 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellulomonas fimi (strain ATCC 484 / DSM 20113 / JCM 1341 / NBRC 15513; / NCIMB 8980 / NCTC 7547).;"
Anthranilate synthase component I n=1 Tax=Cellulomonas fimi (strain ATCC 484 / DSM 20113 / JCM 1341 / NBRC 15513 / NCIMB 8980 / NCTC 7547) RepID=F4GYE2_CELFA
2019_SCN_bioreactor_t1_biofilm_scaffold_20984_12
Cellulomonas flavigena, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9912..10451
DNA (540bp) protein (180aa)
Trp biosynthesis associated, transmembrane protein, Oprn/Chp n=1 Tax=Cellulomonas flavigena (strain ATCC 482 / DSM 20109 / NCIB 8073 / NRS 134) RepID=D5UF89_CELFN
Trp biosynthesis associated, transmembrane protein, Oprn/Chp
Trp biosynthesis associated, transmembrane protein, Oprn/Chp {ECO:0000313|EMBL:ADG74886.1}; TaxID=446466 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellulomonas flavigena (strain ATCC 482 / DSM 20109 / NCIB 8073 / NRS; 134).;"
2019_SCN_bioreactor_t1_biofilm_scaffold_20984_13
Cellulomonas bogoriensis, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10502..10795
DNA (294bp) protein (98aa)
Putative uncharacterized protein n=1 Tax=Cellulomonas flavigena (strain ATCC 482 / DSM 20109 / NCIB 8073 / NRS 134) RepID=D5UF88_CELFN
Membrane protein {ECO:0000313|EMBL:KGM14348.1}; TaxID=1386082 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellulomonas bogoriensis 69B4 = DSM 16987.;"
hypothetical protein
2019_SCN_bioreactor_t1_biofilm_scaffold_20984_14
Bacillus sp. EGD-AK10, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

10832..11401
DNA (570bp) protein (190aa)
hypothetical protein n=1 Tax=Cellulomonas sp. JC225 RepID=UPI00030FBF63
Uncharacterized protein {ECO:0000313|EMBL:ERI41407.1}; TaxID=1386080 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus.;" source="Bacillus sp. EGD-AK10.;"
hypothetical protein
2019_SCN_bioreactor_t1_biofilm_scaffold_20984_15
Cellulosimicrobium sp. MM, Cellulosimicrobium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11405..11848
DNA (444bp) protein (148aa)
hypothetical protein n=1 Tax=Promicromonospora sukumoe RepID=UPI000373E1B2
Uncharacterized protein {ECO:0000313|EMBL:KFD44507.1}; TaxID=1523621 species="Bacteria; Actinobacteria; Micrococcales; Promicromonosporaceae; Cellulosimicrobium.;" source="Cellulosimicrobium sp. MM.;"
hypothetical protein
2019_SCN_bioreactor_t1_biofilm_scaffold_20984_16
[Cellvibrio] gilvus, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11949..12152
DNA (204bp) protein (68aa)
Indole-3-glycerol phosphate synthase {ECO:0000256|SAAS:SAAS00046689}; EC=4.1.1.48 {ECO:0000256|SAAS:SAAS00046705};; TaxID=593907 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellvibrio gilvus (strain ATCC 13127 / NRRL B-14078).;"
Indole-3-glycerol phosphate synthase n=1 Tax=Cellvibrio gilvus (strain ATCC 13127 / NRRL B-14078) RepID=F8A6X4_CELGA
indole-3-glycerol phosphate synthase
2019_SCN_bioreactor_t1_biofilm_scaffold_20984_17
Cellulomonas fimi, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12213..12761
DNA (549bp) protein (183aa)
Indole-3-glycerol-phosphate synthase (EC:4.1.1.48)
Indole-3-glycerol phosphate synthase {ECO:0000256|SAAS:SAAS00046689}; EC=4.1.1.48 {ECO:0000256|SAAS:SAAS00046705};; TaxID=590998 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellulomonas fimi (strain ATCC 484 / DSM 20113 / JCM 1341 / NBRC 15513; / NCIMB 8980 / NCTC 7547).;"
Indole-3-glycerol phosphate synthase n=1 Tax=Cellulomonas fimi (strain ATCC 484 / DSM 20113 / JCM 1341 / NBRC 15513 / NCIMB 8980 / NCTC 7547) RepID=F4GYE8_CELFA
2019_SCN_bioreactor_t1_biofilm_scaffold_20984_18
Aggregatibacter actinomycetemcomitans, Aggregatibacter, Pasteurellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13381..13671)
DNA (291bp) protein (97aa)
Uncharacterized protein n=1 Tax=Aggregatibacter actinomycetemcomitans serotype b str. I23C RepID=G4B2C8_AGGAC
Uncharacterized protein {ECO:0000313|EMBL:EGY49389.1}; TaxID=907492 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pasteurellales; Pasteurellaceae; Aggregatibacter.;" source="Aggregatibacter actinomycetemcomitans serotype b str. I23C.;"
2019_SCN_bioreactor_t1_biofilm_scaffold_20984_19
Cellulomonas flavigena, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13810..14028
DNA (219bp) protein (73aa)
Tryptophan synthase beta chain {ECO:0000256|HAMAP-Rule:MF_00133}; EC=4.2.1.20 {ECO:0000256|HAMAP-Rule:MF_00133};; TaxID=446466 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellulomonas flavigena (strain ATCC 482 / DSM 20109 / NCIB 8073 / NRS; 134).;"
Tryptophan synthase beta chain n=1 Tax=Cellulomonas flavigena (strain ATCC 482 / DSM 20109 / NCIB 8073 / NRS 134) RepID=D5UF83_CELFN
tryptophan synthase subunit beta
2019_SCN_bioreactor_t1_biofilm_scaffold_20984_20
[Cellvibrio] gilvus, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14025..14846
DNA (822bp) protein (274aa)
Tryptophan synthase alpha chain {ECO:0000256|HAMAP-Rule:MF_00131, ECO:0000256|RuleBase:RU000601}; EC=4.2.1.20 {ECO:0000256|HAMAP-Rule:MF_00131, ECO:0000256|RuleBase:RU000601};; TaxID=593907 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellvibrio gilvus (strain ATCC 13127 / NRRL B-14078).;"
tryptophan synthase subunit alpha n=1 Tax=Cellulomonas sp. JC225 RepID=UPI0002D6023B
tryptophan synthase, alpha subunit
2019_SCN_bioreactor_t1_biofilm_scaffold_20984_21
[Cellvibrio] gilvus, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14843..15721
DNA (879bp) protein (293aa)
Prolipoprotein diacylglyceryl transferase {ECO:0000256|HAMAP-Rule:MF_01147, ECO:0000256|SAAS:SAAS00117220}; EC=2.4.99.- {ECO:0000256|HAMAP-Rule:MF_01147, ECO:0000256|SAAS:SAAS00117311};; TaxID=593907 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellvibrio gilvus (strain ATCC 13127 / NRRL B-14078).;"
Prolipoprotein diacylglyceryl transferase n=1 Tax=Cellvibrio gilvus (strain ATCC 13127 / NRRL B-14078) RepID=F8A6X1_CELGA
prolipoprotein diacylglyceryl transferase
2019_SCN_bioreactor_t1_biofilm_scaffold_20984_22
unknown

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comp(15828..16013)
DNA (186bp) protein (62aa)

This feature has no annotations

2019_SCN_bioreactor_t1_biofilm_scaffold_20984_23
Janibacter sp. HTCC2649, Janibacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(16069..18867)
DNA (2799bp) protein (933aa)
Uncharacterized protein n=1 Tax=Janibacter sp. HTCC2649 RepID=A3TLL1_9MICO
Uncharacterized protein {ECO:0000313|EMBL:EAP99266.1}; TaxID=313589 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Janibacter.;" source="Janibacter sp. HTCC2649.;"
hypothetical protein
2019_SCN_bioreactor_t1_biofilm_scaffold_20984_24
Cellulomonas fimi, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

19055..20470
DNA (1416bp) protein (472aa)
glutamate synthase (ferredoxin) (EC:1.4.7.1)
Glutamate synthase (Ferredoxin) {ECO:0000313|EMBL:AEE45941.1}; EC=1.4.7.1 {ECO:0000313|EMBL:AEE45941.1};; TaxID=590998 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellulomonas fimi (strain ATCC 484 / DSM 20113 / JCM 1341 / NBRC 15513; / NCIMB 8980 / NCTC 7547).;"
Glutamate synthase (Ferredoxin) n=1 Tax=Cellulomonas fimi (strain ATCC 484 / DSM 20113 / JCM 1341 / NBRC 15513 / NCIMB 8980 / NCTC 7547) RepID=F4GYF2_CELFA
Displaying 24 items

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