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2019_SCN_bioreactor_t2_biofilm_scaffold_248257

Search features with annotation key words

Displaying items 1-30 of 111 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
2019_SCN_bioreactor_t2_biofilm_scaffold_248257_1
Bradyrhizobium sp. ORS 285, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(180..728)
DNA (549bp) protein (183aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium sp. ORS 285 RepID=H0S6L5_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:CCD89842.1}; TaxID=115808 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. ORS 285.;"
2019_SCN_bioreactor_t2_biofilm_scaffold_248257_2
Bradyrhizobium sp. ORS 285, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(739..1317)
DNA (579bp) protein (193aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium sp. ORS 285 RepID=H0S6L4_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:CCD89841.1}; TaxID=115808 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. ORS 285.;"
2019_SCN_bioreactor_t2_biofilm_scaffold_248257_3
unknown

Not on your lists

comp(1322..1579)
DNA (258bp) protein (86aa)

This feature has no annotations

2019_SCN_bioreactor_t2_biofilm_scaffold_248257_4
Bradyrhizobium sp. ORS 285, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1814..2344)
DNA (531bp) protein (177aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium sp. ORS 285 RepID=H0S6L2_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:CCD89839.1}; TaxID=115808 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. ORS 285.;"
2019_SCN_bioreactor_t2_biofilm_scaffold_248257_5
Bradyrhizobium sp. ORS 285, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2404..3333)
DNA (930bp) protein (310aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium sp. ORS 285 RepID=H0S6L1_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:CCD89838.1}; TaxID=115808 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. ORS 285.;"
hypothetical protein
2019_SCN_bioreactor_t2_biofilm_scaffold_248257_6
Bradyrhizobium sp. ORS 285, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3353..3703)
DNA (351bp) protein (117aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium sp. ORS 285 RepID=H0S6L0_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:CCD89837.1}; TaxID=115808 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. ORS 285.;"
2019_SCN_bioreactor_t2_biofilm_scaffold_248257_7
Bradyrhizobium sp. ORS 285, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3744..4979)
DNA (1236bp) protein (412aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium sp. ORS 285 RepID=H0S6K9_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:CCD89836.1}; TaxID=115808 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. ORS 285.;"
Mu-like prophage FluMu I protein
2019_SCN_bioreactor_t2_biofilm_scaffold_248257_8
Alcaligenes faecalis, Alcaligenes, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5075..5758
DNA (684bp) protein (228aa)
Uncharacterized protein n=1 Tax=Alcaligenes faecalis subsp. faecalis NCIB 8687 RepID=J0JGG3_ALCFA
Uncharacterized protein {ECO:0000313|EMBL:EJC62819.1}; TaxID=1156918 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Alcaligenes.;" source="Alcaligenes faecalis subsp. faecalis NCIB 8687.;"
hypothetical protein
2019_SCN_bioreactor_t2_biofilm_scaffold_248257_9
Bradyrhizobium sp. ORS 285, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5766..8069)
DNA (2304bp) protein (768aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium sp. ORS 285 RepID=H0S6K6_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:CCD89833.1}; TaxID=115808 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. ORS 285.;"
hypothetical protein
2019_SCN_bioreactor_t2_biofilm_scaffold_248257_10
Bradyrhizobium sp. ORS 285, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8094..9446)
DNA (1353bp) protein (451aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium sp. ORS 285 RepID=H0S6K5_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:CCD89832.1}; TaxID=115808 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. ORS 285.;"
2019_SCN_bioreactor_t2_biofilm_scaffold_248257_11

Not on your lists

comp(9616..10209)
DNA (594bp) protein (198aa)
Uncharacterized protein {ECO:0000313|EMBL:KKN73594.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
2019_SCN_bioreactor_t2_biofilm_scaffold_248257_12
Bradyrhizobium sp. LTSP849, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11025..11810
DNA (786bp) protein (262aa)
Uncharacterized protein {ECO:0000313|EMBL:KJC53473.1}; TaxID=1615890 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSP849.;"
2019_SCN_bioreactor_t2_biofilm_scaffold_248257_13
unknown

Not on your lists

comp(12360..12989)
DNA (630bp) protein (210aa)

This feature has no annotations

2019_SCN_bioreactor_t2_biofilm_scaffold_248257_14
unknown

Not on your lists

comp(13097..13282)
DNA (186bp) protein (62aa)

This feature has no annotations

2019_SCN_bioreactor_t2_biofilm_scaffold_248257_15
Ruegeria pomeroyi, Ruegeria, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13285..14004)
DNA (720bp) protein (240aa)
Uncharacterized protein n=1 Tax=Ruegeria pomeroyi (strain ATCC 700808 / DSM 15171 / DSS-3) RepID=Q5LU35_RUEPO
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAV94518.1}; TaxID=246200 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Ruegeria.;" source="Ruegeria pomeroyi (strain ATCC 700808 / DSM 15171 / DSS-3); (Silicibacter pomeroyi).;"
2019_SCN_bioreactor_t2_biofilm_scaffold_248257_16
unknown

Not on your lists

14134..14532
DNA (399bp) protein (133aa)

This feature has no annotations

2019_SCN_bioreactor_t2_biofilm_scaffold_248257_17
Bradyrhizobium sp. LTSP885, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14562..15356)
DNA (795bp) protein (265aa)
Uncharacterized protein {ECO:0000313|EMBL:KJC49083.1}; TaxID=1619232 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSP885.;"
2019_SCN_bioreactor_t2_biofilm_scaffold_248257_18
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15394..16266)
DNA (873bp) protein (291aa)
Putative uncharacterized protein n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HQC7_9RHIZ
Putative uncharacterized protein {ECO:0000313|EMBL:EHK57049.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
2019_SCN_bioreactor_t2_biofilm_scaffold_248257_19

Not on your lists

comp(16460..19039)
DNA (2580bp) protein (860aa)
Uncharacterized protein n=1 Tax=mine drainage metagenome RepID=E6PH09_9ZZZZ
Uncharacterized protein {ECO:0000313|EMBL:CBH75747.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
hypothetical protein
2019_SCN_bioreactor_t2_biofilm_scaffold_248257_20
RHI_RIF-OD1-04_45_11b, RIF-OD1-4, Parcubacteria, Bacteria

Not on your lists

comp(19075..20292)
DNA (1218bp) protein (406aa)
Putative uncharacterized protein id=1987453 bin=GWE2_OD1_38_254 species=GWE2_OD1_38_254 genus=GWE2_OD1_38_254 taxon_order=GWE2_OD1_38_254 taxon_class=GWE2_OD1_38_254 phylum=OD1 tax=GWE2_OD1_38_254 organism_group=OD1 (Parcubacteria)
hypothetical protein
Tax=RIFCSPHIGHO2_12_FULL_RIF-OD1-04_45_11b_curated
2019_SCN_bioreactor_t2_biofilm_scaffold_248257_21
unknown

Not on your lists

comp(20803..21069)
DNA (267bp) protein (89aa)

This feature has no annotations

2019_SCN_bioreactor_t2_biofilm_scaffold_248257_22
Octadecabacter antarcticus, Octadecabacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21127..22188)
DNA (1062bp) protein (354aa)
DNA integration/recombination/inversion protein n=1 Tax=Octadecabacter antarcticus 307 RepID=M9R9X2_9RHOB
putative phage integrase
DNA integration/recombination/inversion protein {ECO:0000313|EMBL:AGI68613.1}; TaxID=391626 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Octadecabacter.;" source="Octadecabacter antarcticus 307.;"
2019_SCN_bioreactor_t2_biofilm_scaffold_248257_23
Gluconacetobacter diazotrophicus, Gluconacetobacter, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22398..22703)
DNA (306bp) protein (102aa)
ETC complex I subunit conserved region n=1 Tax=Gluconacetobacter diazotrophicus (strain ATCC 49037 / DSM 5601 / PAl5) RepID=A9H0R5_GLUDA
ETC complex subunit I
ETC complex I subunit conserved region {ECO:0000313|EMBL:ACI52871.1}; Putative oxidoreductase {ECO:0000313|EMBL:CAP57163.1}; TaxID=272568 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Gluconacetobacter.;" source="Gluconacetobacter diazotrophicus (strain ATCC 49037 / DSM 5601 /; PAl5).;"
2019_SCN_bioreactor_t2_biofilm_scaffold_248257_24
Skermanella stibiiresistens, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22906..23946)
DNA (1041bp) protein (347aa)
Putative ABC transporter (Permease protein) ribose transport system n=1 Tax=Bradyrhizobium sp. STM 3843 RepID=H0THI0_9BRAD
ABC transporter permease {ECO:0000313|EMBL:EWY39019.1}; TaxID=1385369 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella stibiiresistens SB22.;"
putative ABC transporter
2019_SCN_bioreactor_t2_biofilm_scaffold_248257_25
Inquilinus limosus, Inquilinus, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23957..25447)
DNA (1491bp) protein (497aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI000368BE20
ABC transporter ATP-binding protein {ECO:0000313|EMBL:KGM34602.1}; TaxID=1398085 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Inquilinus.;" source="Inquilinus limosus MP06.;"
ABC transporter ATP-binding protein
2019_SCN_bioreactor_t2_biofilm_scaffold_248257_26
Skermanella aerolata, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25459..26493)
DNA (1035bp) protein (345aa)
Putative ABC transporter (Substrate-binding protein) ribose transport system n=1 Tax=Bradyrhizobium sp. ORS 375 RepID=H0SAJ0_9BRAD
ABC transporter substrate-binding protein {ECO:0000313|EMBL:KJB94483.1}; TaxID=1385368 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella aerolata KACC 11604.;"
ABC transporter substrate-binding protein
2019_SCN_bioreactor_t2_biofilm_scaffold_248257_27
Acidisphaera rubrifaciens, Acidisphaera, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26928..28148
DNA (1221bp) protein (407aa)
ABC transporter substrate-binding protein n=1 Tax=Bradyrhizobium sp. STM 3843 RepID=H0TN12_9BRAD
ABC transporter branched-chain amino acid permease {ECO:0000313|EMBL:GAN76562.1}; TaxID=1231350 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidisphaera.;" source="Acidisphaera rubrifaciens HS-AP3.;"
ABC transporter substrate-binding protein
2019_SCN_bioreactor_t2_biofilm_scaffold_248257_28
Acidisphaera rubrifaciens, Acidisphaera, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28239..29114
DNA (876bp) protein (292aa)
Inner-membrane translocator n=1 Tax=Burkholderia terrae BS001 RepID=I5CFQ9_9BURK
Innermembrane translocator {ECO:0000313|EMBL:GAN76563.1}; TaxID=1231350 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidisphaera.;" source="Acidisphaera rubrifaciens HS-AP3.;"
inner-membrane translocator
2019_SCN_bioreactor_t2_biofilm_scaffold_248257_29
Acidisphaera rubrifaciens, Acidisphaera, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29149..30066
DNA (918bp) protein (306aa)
Inner-membrane translocator n=1 Tax=Methylobacterium nodulans (strain ORS2060 / LMG 21967) RepID=B8IU71_METNO
Innermembrane translocator {ECO:0000313|EMBL:GAN76564.1}; TaxID=1231350 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidisphaera.;" source="Acidisphaera rubrifaciens HS-AP3.;"
inner-membrane translocator
2019_SCN_bioreactor_t2_biofilm_scaffold_248257_30
Acidisphaera rubrifaciens, Acidisphaera, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30063..31526
DNA (1464bp) protein (488aa)
ABC transporter related n=1 Tax=Methylobacterium nodulans (strain ORS2060 / LMG 21967) RepID=B8IU72_METNO
ABC transporter {ECO:0000313|EMBL:GAN76565.1}; TaxID=1231350 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidisphaera.;" source="Acidisphaera rubrifaciens HS-AP3.;"
ABC transporter-like protein
Displaying items 1-30 of 111 in total

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