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2019_SCN_bioreactor_t3_biofilm_scaffold_108133

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Displaying 7 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
2019_SCN_bioreactor_t3_biofilm_scaffold_108133_1
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2..514)
DNA (513bp) protein (171aa)
Cysteine ABC transporter permease/ATP-binding protein n=1 Tax=Novosphingobium nitrogenifigens DSM 19370 RepID=F1Z608_9SPHN
Transport ATP-binding protein cydD {ECO:0000313|EMBL:GAO54832.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;"
cysteine ABC transporter permease/ATP-binding protein
2019_SCN_bioreactor_t3_biofilm_scaffold_108133_2
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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669..2249
DNA (1581bp) protein (527aa)
cytochrome BD oxidase subunit I n=1 Tax=Novosphingobium sp. B-7 RepID=UPI0003B4871D
Cytochrome d ubiquinol oxidase subunit I {ECO:0000313|EMBL:GAO54834.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;"
cytochrome bd ubiquinol oxidase subunit I
2019_SCN_bioreactor_t3_biofilm_scaffold_108133_3
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2482..3237
DNA (756bp) protein (252aa)
cydB; cytochrome bd-type quinol oxidase, subunit 2 cydB (EC:1.10.3.-)
cytochrome BD oxidase subunit II n=1 Tax=Novosphingobium sp. B-7 RepID=UPI0003B4F1EB
Cytochrome d ubiquinol oxidase subunit II {ECO:0000313|EMBL:GAO54835.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;"
2019_SCN_bioreactor_t3_biofilm_scaffold_108133_4
Novosphingobium malaysiense, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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3250..3360
DNA (111bp) protein (37aa)
Cyd operon protein YbgT n=1 Tax=Sphingomonas sp. MM-1 RepID=M4S776_9SPHN
Membrane protein {ECO:0000313|EMBL:KHK91130.1}; TaxID=1348853 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium malaysiense.;"
cyd operon protein YbgT
2019_SCN_bioreactor_t3_biofilm_scaffold_108133_5
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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3530..3871
DNA (342bp) protein (114aa)
hypothetical protein n=1 Tax=Sphingobium xenophagum RepID=UPI00036D4290
Transcriptional regulator of arsR family {ECO:0000313|EMBL:GAO54836.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;"
ArsR family transcriptional regulator
2019_SCN_bioreactor_t3_biofilm_scaffold_108133_6
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3876..4484)
DNA (609bp) protein (203aa)
hypothetical protein n=1 Tax=Novosphingobium sp. B-7 RepID=UPI0003B4E887
HNH endonuclease family protein {ECO:0000313|EMBL:GAO54837.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;"
HNH endonuclease
2019_SCN_bioreactor_t3_biofilm_scaffold_108133_7
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4733..5506)
DNA (774bp) protein (258aa)
hypothetical protein n=1 Tax=Porphyrobacter sp. AAP82 RepID=UPI0002F55C23
Peptidase M20:Peptidase dimerisation {ECO:0000313|EMBL:GAO54838.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;"
hypothetical protein
Displaying 7 items

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