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2019_SCN_bioreactor_t3_biofilm_scaffold_108854

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
2019_SCN_bioreactor_t3_biofilm_scaffold_108854_1
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3..491)
DNA (489bp) protein (163aa)
TonB-dependent receptor n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=A4XEF2_NOVAD
Uncharacterized protein {ECO:0000313|EMBL:GAO53519.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;"
TonB-dependent receptor
2019_SCN_bioreactor_t3_biofilm_scaffold_108854_2
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(615..1382)
DNA (768bp) protein (256aa)
IclR family transcriptional regulator n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IKP1_9SPHN
Transcriptional regulator of iclR family {ECO:0000313|EMBL:GAO53520.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;"
IclR family transcriptional regulator
2019_SCN_bioreactor_t3_biofilm_scaffold_108854_3
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1511..1966)
DNA (456bp) protein (152aa)
Putative uncharacterized protein n=1 Tax=Sphingobium sp. SYK-6 RepID=G2INX2_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:GAO53521.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;"
hypothetical protein
2019_SCN_bioreactor_t3_biofilm_scaffold_108854_4
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2043..2525)
DNA (483bp) protein (161aa)
hypothetical protein n=1 Tax=Novosphingobium sp. B-7 RepID=UPI0003B4119F
Uncharacterized protein {ECO:0000313|EMBL:GAO53522.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;"
hypothetical protein
2019_SCN_bioreactor_t3_biofilm_scaffold_108854_5
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2683..3318)
DNA (636bp) protein (212aa)
Uncharacterized protein n=1 Tax=Novosphingobium sp. AP12 RepID=J2P1K2_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:GAO53566.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;"
twin-arginine translocation pathway signal protein
2019_SCN_bioreactor_t3_biofilm_scaffold_108854_6
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3548..4390
DNA (843bp) protein (281aa)
Acid phosphatase {ECO:0000256|PIRNR:PIRNR000897}; EC=3.1.3.2 {ECO:0000256|PIRNR:PIRNR000897};; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;"
acid phosphatase (EC:3.1.3.2)
Putative acid phosphatase n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2ZVZ7_9SPHN
2019_SCN_bioreactor_t3_biofilm_scaffold_108854_7
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4409..5389)
DNA (981bp) protein (327aa)
Butyryl-CoA dehydrogenase {ECO:0000313|EMBL:GAO53568.1}; EC=1.3.8.1 {ECO:0000313|EMBL:GAO53568.1};; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;"
Acyl-CoA dehydrogenase domain protein n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=A4XEX3_NOVAD
acyl-CoA dehydrogenase domain-containing protein
2019_SCN_bioreactor_t3_biofilm_scaffold_108854_8
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5407..6552)
DNA (1146bp) protein (382aa)
Long-chain-acyl-CoA dehydrogenase {ECO:0000313|EMBL:GAO53569.1}; EC=1.3.8.8 {ECO:0000313|EMBL:GAO53569.1};; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;"
Acyl-CoA dehydrogenase domain protein n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=A4XEX2_NOVAD
acyl-CoA dehydrogenase domain-containing protein
2019_SCN_bioreactor_t3_biofilm_scaffold_108854_9
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6690..7379)
DNA (690bp) protein (230aa)
KDP operon transcriptional regulatory protein KdpE n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IMI8_9SPHN
Sensor histidine kinase {ECO:0000313|EMBL:GAO53570.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;"
kdpE; KDP operon transcriptional regulatory protein KdpE
2019_SCN_bioreactor_t3_biofilm_scaffold_108854_10
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7390..7959)
DNA (570bp) protein (190aa)
Two-component histidine kinase KdpD n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2ZYI5_9SPHN
Osmosensitive K+ channel histidine kinase kdpD {ECO:0000313|EMBL:GAO53571.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;"
histidine kinase
Displaying 10 items

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