name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
2019_SCN_bioreactor_t3_biofilm_scaffold_20329_1
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
2..541
|
molybdenum cofactor sulfurase n=1 Tax=Novosphingobium sp. B-7 RepID=UPI0003B325DC
Flavodoxin reductases (Ferredoxin-NADPH reductases) family 1 {ECO:0000313|EMBL:GAO54814.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;"
putative Fe-S protein
|
|
2019_SCN_bioreactor_t3_biofilm_scaffold_20329_2
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(538..954)
|
Uncharacterized protein n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G980_NOVAD
Integral membrane protein {ECO:0000313|EMBL:GAO54815.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;"
hypothetical protein
|
|
2019_SCN_bioreactor_t3_biofilm_scaffold_20329_3
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(1098..3863)
|
TonB-dependent receptor n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G596_NOVAD
TonB-dependent receptor {ECO:0000313|EMBL:GAO54816.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;"
TonB-dependent receptor
|
|
2019_SCN_bioreactor_t3_biofilm_scaffold_20329_4
Sphingopyxis alaskensis, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
4290..6017
|
GTP-binding protein TypA n=1 Tax=Sphingopyxis alaskensis (strain DSM 13593 / LMG 18877 / RB2256) RepID=Q1GQR0_SPHAL
GTP-binding protein TypA
GTP-binding protein TypA {ECO:0000313|EMBL:ABF54012.1}; TaxID=317655 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis alaskensis (strain DSM 13593 / LMG 18877 / RB2256); (Sphingomonas alaskensis).;"
|
|
2019_SCN_bioreactor_t3_biofilm_scaffold_20329_5
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(6104..7351)
|
transglutaminase n=1 Tax=Sphingomonas echinoides RepID=UPI00026CA07D
Uncharacterized protein {ECO:0000313|EMBL:GAO54819.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;"
hypothetical protein
|
|
2019_SCN_bioreactor_t3_biofilm_scaffold_20329_6
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(7291..8646)
|
transglutaminase n=1 Tax=Sphingomonas echinoides RepID=UPI00026CA07D
Uncharacterized protein {ECO:0000313|EMBL:GAO54819.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;"
hypothetical protein
|
|
2019_SCN_bioreactor_t3_biofilm_scaffold_20329_7
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
8965..9438
|
Uncharacterized protein n=1 Tax=Beijerinckia indica subsp. indica (strain ATCC 9039 / DSM 1715 / NCIB 8712) RepID=B2IHU1_BEII9
Uncharacterized protein {ECO:0000313|EMBL:GAO54820.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;"
hypothetical protein
|
|
2019_SCN_bioreactor_t3_biofilm_scaffold_20329_8
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
9605..10003
|
hypothetical protein n=1 Tax=Sphingomonas sp. Mn802worker RepID=UPI000373B3EB
Uncharacterized protein {ECO:0000313|EMBL:GAO54821.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;"
hypothetical protein
|
|
2019_SCN_bioreactor_t3_biofilm_scaffold_20329_9
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
10079..11272
|
Glycosyl transferase, group 1 n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G593_NOVAD
Glycosyltransferase {ECO:0000313|EMBL:GAO54822.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;"
group 1 glycosyl transferase
|
|
2019_SCN_bioreactor_t3_biofilm_scaffold_20329_10
Mesorhizobium loti, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
11355..11990
|
Mlr8301 protein n=1 Tax=Rhizobium loti (strain MAFF303099) RepID=Q983J6_RHILO
hypothetical protein
Mlr8301 protein {ECO:0000313|EMBL:BAB53885.1}; TaxID=266835 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Rhizobium loti (strain MAFF303099) (Mesorhizobium loti).;"
|
|
2019_SCN_bioreactor_t3_biofilm_scaffold_20329_11
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(12018..12494)
|
Crossover junction endodeoxyribonuclease RuvC {ECO:0000256|HAMAP-Rule:MF_00034, ECO:0000256|SAAS:SAAS00106335}; EC=3.1.22.4 {ECO:0000256|HAMAP-Rule:MF_00034, ECO:0000256|SAAS:SAAS00106388};; Holliday junction nuclease RuvC {ECO:0000256|HAMAP-Rule:MF_00034}; Holliday junction resolvase RuvC {ECO:0000256|HAMAP-Rule:MF_00034}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;"
Crossover junction endodeoxyribonuclease RuvC n=1 Tax=Novosphingobium sp. Rr 2-17 RepID=I9L912_9SPHN
crossover junction endodeoxyribonuclease RuvC
|
|
2019_SCN_bioreactor_t3_biofilm_scaffold_20329_12
Sphingomonas sp. LH128, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(12496..12846)
|
Uncharacterized protein n=1 Tax=Sphingomonas sp. LH128 RepID=J8W2X0_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:EJU14668.1}; TaxID=473781 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. LH128.;"
hypothetical protein
|
|
2019_SCN_bioreactor_t3_biofilm_scaffold_20329_13
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(12866..13609)
|
Probable transcriptional regulatory protein Y88_2002 n=1 Tax=Novosphingobium nitrogenifigens DSM 19370 RepID=F1Z5L8_9SPHN
Probable transcriptional regulatory protein NMD1_01926 {ECO:0000256|HAMAP-Rule:MF_00693}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;"
transcriptional regulator
|
|
2019_SCN_bioreactor_t3_biofilm_scaffold_20329_14
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(14149..14526)
|
hypothetical protein n=1 Tax=Novosphingobium sp. B-7 RepID=UPI0003B56A6D
Uncharacterized protein {ECO:0000313|EMBL:GAO54826.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;"
hypothetical protein
|
|
2019_SCN_bioreactor_t3_biofilm_scaffold_20329_15
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
14586..16052
|
Pyruvate kinase {ECO:0000256|RuleBase:RU000504}; EC=2.7.1.40 {ECO:0000256|RuleBase:RU000504};; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;"
pyruvate kinase (EC:2.7.1.40)
Pyruvate kinase n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2GB93_NOVAD
|
|
2019_SCN_bioreactor_t3_biofilm_scaffold_20329_16
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
16144..17805
|
UPI0003D6199F related cluster n=1 Tax=unknown RepID=UPI0003D6199F
Low-affinity inorganic phosphate transporter {ECO:0000313|EMBL:GAO54828.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;"
phosphate transporter
|
|
2019_SCN_bioreactor_t3_biofilm_scaffold_20329_17
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(17845..18813)
|
L-fuco-beta-pyranose dehydrogenase {ECO:0000313|EMBL:GAO54829.1}; EC=1.1.1.122 {ECO:0000313|EMBL:GAO54829.1};; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;"
Putative oxidoreductase n=1 Tax=Gluconacetobacter diazotrophicus (strain ATCC 49037 / DSM 5601 / PAl5) RepID=A9H878_GLUDA
Short-chain dehydrogenase/reductase SDR
|
|
2019_SCN_bioreactor_t3_biofilm_scaffold_20329_18
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
18949..19545
|
Transcriptional regulator, TetR family n=1 Tax=Gluconacetobacter diazotrophicus (strain ATCC 49037 / DSM 5601 / PAl5) RepID=B5ZII9_GLUDA
Transcriptional regulator of tetR family {ECO:0000313|EMBL:GAO54830.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;"
TetR family transcriptional regulator
|
|
2019_SCN_bioreactor_t3_biofilm_scaffold_20329_19
Novosphingobium nitrogenifigens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(19549..21129)
|
ABC transporter related protein n=1 Tax=Novosphingobium nitrogenifigens DSM 19370 RepID=F1Z607_9SPHN
ABC transporter related protein {ECO:0000313|EMBL:EGD59971.1}; TaxID=983920 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium nitrogenifigens DSM 19370.;"
ABC transporter-like protein
|
|
2019_SCN_bioreactor_t3_biofilm_scaffold_20329_20
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(21114..21344)
|
Cysteine ABC transporter permease/ATP-binding protein n=1 Tax=Novosphingobium nitrogenifigens DSM 19370 RepID=F1Z608_9SPHN
Transport ATP-binding protein cydD {ECO:0000313|EMBL:GAO54832.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;"
cysteine ABC transporter permease/ATP-binding protein
|