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2019_SCN_bioreactor_t3_biofilm_scaffold_112403

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Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
2019_SCN_bioreactor_t3_biofilm_scaffold_112403_1
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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2..1162
DNA (1161bp) protein (387aa)
UPI0003CFF4BB related cluster n=1 Tax=unknown RepID=UPI0003CFF4BB
Uncharacterized protein {ECO:0000313|EMBL:GAO54775.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;"
peptidase C14, caspase catalytic subunit p20
2019_SCN_bioreactor_t3_biofilm_scaffold_112403_2
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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1162..1695
DNA (534bp) protein (178aa)
Heat shock protein DnaJ-like protein n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G9K9_NOVAD
DnaJ-class molecular chaperone {ECO:0000313|EMBL:GAO54776.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;"
molecular chaperone DnaJ
2019_SCN_bioreactor_t3_biofilm_scaffold_112403_3
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1739..2920)
DNA (1182bp) protein (394aa)
tRNA nucleotidyltransferase {ECO:0000313|EMBL:GAO54777.1}; EC=2.7.7.72 {ECO:0000313|EMBL:GAO54777.1};; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;"
Polynucleotide adenylyltransferase region n=1 Tax=Novosphingobium nitrogenifigens DSM 19370 RepID=F1ZBW9_9SPHN
polynucleotide adenylyltransferase
2019_SCN_bioreactor_t3_biofilm_scaffold_112403_4
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2917..3525)
DNA (609bp) protein (203aa)
NUDIX hydrolase n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G9K6_NOVAD
Hypothetical nudix hydrolase yeaB {ECO:0000313|EMBL:GAO54778.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;"
NUDIX hydrolase
2019_SCN_bioreactor_t3_biofilm_scaffold_112403_5
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3522..4097)
DNA (576bp) protein (192aa)
Putative uncharacterized protein n=1 Tax=Novosphingobium nitrogenifigens DSM 19370 RepID=F1ZBW7_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:GAO54779.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;"
hypothetical protein
2019_SCN_bioreactor_t3_biofilm_scaffold_112403_6
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4121..4528)
DNA (408bp) protein (136aa)
Acetyltransferase-like protein n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G9K4_NOVAD
PhnO protein {ECO:0000313|EMBL:GAO54780.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;"
acetyltransferase-like
2019_SCN_bioreactor_t3_biofilm_scaffold_112403_7
unknown

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4970..5248
DNA (279bp) protein (93aa)

This feature has no annotations

2019_SCN_bioreactor_t3_biofilm_scaffold_112403_8
unknown

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5342..6085
DNA (744bp) protein (248aa)

This feature has no annotations

2019_SCN_bioreactor_t3_biofilm_scaffold_112403_9
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6194..7489
DNA (1296bp) protein (432aa)
Isocitrate lyase {ECO:0000313|EMBL:GAO54782.1}; EC=4.1.3.1 {ECO:0000313|EMBL:GAO54782.1};; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;"
isocitrate lyase (EC:4.1.3.1)
Isocitrate lyase n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G9J9_NOVAD
Displaying 9 items

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