name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
2019_SCN_bioreactor_t3_biofilm_scaffold_79289_1
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(2..616)
|
3-oxoacyl-[acyl-carrier protein] reductase {ECO:0000313|EMBL:GAO55045.1}; EC=1.1.1.100 {ECO:0000313|EMBL:GAO55045.1};; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;"
Putative oxidoreductase (EC:1.-.-.-)
Dehydrogenase n=1 Tax=Novosphingobium nitrogenifigens DSM 19370 RepID=F1ZBP8_9SPHN
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2019_SCN_bioreactor_t3_biofilm_scaffold_79289_2
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
729..1619
|
Putative transcriptional regulator n=1 Tax=Novosphingobium nitrogenifigens DSM 19370 RepID=F1ZBP7_9SPHN
Transcriptional regulator of lysR family {ECO:0000313|EMBL:GAO55044.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;"
transcriptional regulator
|
|
2019_SCN_bioreactor_t3_biofilm_scaffold_79289_3
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(1807..4206)
|
TonB-denpendent receptor n=1 Tax=Sphingomonas echinoides RepID=UPI00026CA5F7
TonB-dependent receptor {ECO:0000313|EMBL:GAO55015.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;"
TonB-dependent receptor
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2019_SCN_bioreactor_t3_biofilm_scaffold_79289_4
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(5028..5555)
|
RNA polymerase sigma-70 factor n=1 Tax=Sphingomonas elodea RepID=UPI00026321A1
RNA polymerase sigma-70 factor, ECF subfamily {ECO:0000313|EMBL:GAO55013.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;"
RNA polymerase sigma-70 factor
|
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2019_SCN_bioreactor_t3_biofilm_scaffold_79289_5
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(5582..6409)
|
hypothetical protein n=1 Tax=Sphingomonas melonis RepID=UPI00036034A4
Uncharacterized protein {ECO:0000313|EMBL:GAO55012.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;"
hypothetical protein
|
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2019_SCN_bioreactor_t3_biofilm_scaffold_79289_6
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(6402..7283)
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glycosyl transferase family 2 n=1 Tax=Sphingomonas sp. PAMC 26605 RepID=UPI00026CDE00
Polysaccharide deacetylase {ECO:0000313|EMBL:GAO55011.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;"
glycosyl transferase family 2
|
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2019_SCN_bioreactor_t3_biofilm_scaffold_79289_7
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(7423..8307)
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UTP--glucose-1-phosphate uridylyltransferase {ECO:0000313|EMBL:GAO55010.1}; EC=2.7.7.9 {ECO:0000313|EMBL:GAO55010.1};; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;"
UDP-glucose pyrophosphorylase (EC:2.7.7.9)
UDP-glucose pyrophosphorylase n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2GB75_NOVAD
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2019_SCN_bioreactor_t3_biofilm_scaffold_79289_8
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(8707..9588)
|
Succinyl-CoA ligase [ADP-forming] subunit alpha {ECO:0000256|RuleBase:RU000699}; EC=6.2.1.5 {ECO:0000256|RuleBase:RU000699};; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;"
succinyl-CoA synthetase (ADP-forming) subunit alpha (EC:6.2.1.5)
succinyl-CoA synthetase subsunit alpha n=1 Tax=Novosphingobium sp. B-7 RepID=UPI0003B6D05B
|
|
2019_SCN_bioreactor_t3_biofilm_scaffold_79289_9
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(9592..9897)
|
Succinyl-CoA ligase [ADP-forming] subunit beta {ECO:0000256|HAMAP-Rule:MF_00558}; EC=6.2.1.5 {ECO:0000256|HAMAP-Rule:MF_00558};; Succinyl-CoA synthetase subunit beta {ECO:0000256|HAMAP-Rule:MF_00558}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;"
sucC; succinyl-CoA synthetase subunit beta (EC:6.2.1.5)
Succinyl-CoA ligase [ADP-forming] subunit beta n=1 Tax=Sphingomonas sp. SKA58 RepID=Q1N773_9SPHN
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2019_SCN_bioreactor_t3_biofilm_scaffold_79289_10
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(10958..11890)
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Electron transfer flavoprotein, alpha subunit n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G3H0_NOVAD
Electron transfer flavoprotein, alpha subunit {ECO:0000313|EMBL:GAO55006.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;"
electron transfer flavoprotein subunit alpha
|
|
2019_SCN_bioreactor_t3_biofilm_scaffold_79289_11
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(11892..12638)
|
Electron transfer flavoprotein beta-subunit n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G3G9_NOVAD
Electron transfer flavoprotein, beta subunit {ECO:0000313|EMBL:GAO54152.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;"
electron transfer flavoprotein subunit beta
|
|
2019_SCN_bioreactor_t3_biofilm_scaffold_79289_12
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(12687..15815)
|
Propionyl-CoA carboxylase biotin-containing subunit {ECO:0000313|EMBL:GAO55004.1}; EC=6.4.1.3 {ECO:0000313|EMBL:GAO55004.1};; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;"
Biotin carboxyl carrier protein / biotin carboxylase n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2GA63_NOVAD
carbamoyl-phosphate synthase L chain, ATP-binding
|
|
2019_SCN_bioreactor_t3_biofilm_scaffold_79289_13
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(15849..16856)
|
Methylmalonyl-CoA mutase {ECO:0000313|EMBL:GAO55002.1}; EC=5.4.99.2 {ECO:0000313|EMBL:GAO55002.1};; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;"
methylmalonyl-CoA mutase (EC:5.4.99.2)
Methylmalonyl-CoA mutase n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2GA67_NOVAD
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|
2019_SCN_bioreactor_t3_biofilm_scaffold_79289_14
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(16874..17983)
|
Methylmalonyl-CoA mutase {ECO:0000313|EMBL:GAO55002.1}; EC=5.4.99.2 {ECO:0000313|EMBL:GAO55002.1};; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;"
methylmalonyl-CoA mutase (EC:5.4.99.2)
Methylmalonyl-CoA mutase n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2GA67_NOVAD
|
|
2019_SCN_bioreactor_t3_biofilm_scaffold_79289_15
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(18073..18510)
|
Methylmalonyl-CoA epimerase {ECO:0000313|EMBL:GAO55001.1}; EC=5.1.99.1 {ECO:0000313|EMBL:GAO55001.1};; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;"
methylmalonyl-CoA epimerase (EC:5.1.99.1)
Methylmalonyl-CoA epimerase n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2GA68_NOVAD
|
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2019_SCN_bioreactor_t3_biofilm_scaffold_79289_16
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(18512..19690)
|
beta-ketothiolase (EC:2.3.1.9)
Acetyl-CoA C-acetyltransferase n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2GA69_NOVAD
Uncharacterized protein {ECO:0000313|EMBL:GAO55000.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;"
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2019_SCN_bioreactor_t3_biofilm_scaffold_79289_17
Novosphingobium subterraneum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(19717..21243)
|
Propionyl-CoA carboxylase carboxyltransferase subunit n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2GA70_NOVAD
carboxyl transferase
Carboxyl transferase {ECO:0000313|EMBL:KHS48826.1}; TaxID=48936 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium subterraneum.;"
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2019_SCN_bioreactor_t3_biofilm_scaffold_79289_18
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
21358..22779
|
XRE family transcriptional regulator n=1 Tax=Novosphingobium nitrogenifigens DSM 19370 RepID=F1Z5E7_9SPHN
Transcriptional regulator of XRE family {ECO:0000313|EMBL:GAO54998.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;"
XRE family transcriptional regulator
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2019_SCN_bioreactor_t3_biofilm_scaffold_79289_19
Sphingopyxis fribergensis, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(22820..23740)
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energy transducer TonB n=1 Tax=Sphingomonas phyllosphaerae RepID=UPI0003B61BDE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJA10414.1}; TaxID=1515612 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis fribergensis.;"
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2019_SCN_bioreactor_t3_biofilm_scaffold_79289_20
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(23831..23950)
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C4-dicarboxylate ABC transporter n=1 Tax=Sphingomonas elodea RepID=UPI000263101B
C4-dicarboxylate transport protein {ECO:0000256|HAMAP-Rule:MF_01300}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;"
C4-dicarboxylate transporter
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