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2019_SCN_bioreactor_t3_biofilm_scaffold_121613

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Displaying 6 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
2019_SCN_bioreactor_t3_biofilm_scaffold_121613_1
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(36..503)
DNA (468bp) protein (156aa)
GreA/GreB family elongation factor n=2 Tax=Novosphingobium nitrogenifigens RepID=F1ZC11_9SPHN
Transcription elongation factor greB {ECO:0000313|EMBL:GAO56476.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;"
GreA/GreB family elongation factor
2019_SCN_bioreactor_t3_biofilm_scaffold_121613_2
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(500..1822)
DNA (1323bp) protein (441aa)
Putative uncharacterized protein n=1 Tax=Novosphingobium nitrogenifigens DSM 19370 RepID=F1ZC12_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:GAO56477.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;"
molecular chaperone DnaK
2019_SCN_bioreactor_t3_biofilm_scaffold_121613_3
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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2039..3784
DNA (1746bp) protein (582aa)
hydrolase n=1 Tax=Novosphingobium sp. B-7 RepID=UPI0003B2F94E
Exoenzymes regulatory protein aepA {ECO:0000313|EMBL:GAO56478.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;"
putative hydrolase
2019_SCN_bioreactor_t3_biofilm_scaffold_121613_4
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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4195..4944
DNA (750bp) protein (250aa)
Gamma-aminobutyrate permease n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IMK0_9SPHN
Aromatic amino acid transport protein aroP {ECO:0000313|EMBL:GAO56479.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;"
gabP; gamma-aminobutyrate permease
2019_SCN_bioreactor_t3_biofilm_scaffold_121613_5
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4941..6329)
DNA (1389bp) protein (463aa)
Adenosylmethionine-8-amino-7-oxononanoate aminotransferase {ECO:0000313|EMBL:GAO56480.1}; EC=2.6.1.62 {ECO:0000313|EMBL:GAO56480.1};; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;"
Uncharacterized protein n=1 Tax=Novosphingobium sp. PP1Y RepID=F6IDH7_9SPHN
hypothetical protein
2019_SCN_bioreactor_t3_biofilm_scaffold_121613_6
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(6407..6802)
DNA (396bp) protein (132aa)
hypothetical protein n=1 Tax=Porphyrobacter sp. AAP82 RepID=UPI000307C1FB
3-(3-hydroxy-phenyl)propionate hydroxylase {ECO:0000313|EMBL:GAO56481.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;"
FAD-binding monooxygenase
Displaying 6 items

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