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2019_SCN_bioreactor_t3_biofilm_scaffold_118083

Search features with annotation key words

Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
2019_SCN_bioreactor_t3_biofilm_scaffold_118083_1
unknown

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comp(3..68)
DNA (66bp) protein (22aa)

This feature has no annotations

2019_SCN_bioreactor_t3_biofilm_scaffold_118083_2
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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147..1760
DNA (1614bp) protein (538aa)
FAD dependent oxidoreductase n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G7R0_NOVAD
Beta-carotene ketolase {ECO:0000313|EMBL:GAO53871.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;"
FAD dependent oxidoreductase
2019_SCN_bioreactor_t3_biofilm_scaffold_118083_3
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1714..3018)
DNA (1305bp) protein (435aa)
Amino acid/polyamine/organocation transporter, APC superfamily n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G7Q9_NOVAD
Amino acid permease {ECO:0000313|EMBL:GAO53870.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;"
phospholipid binding protein
2019_SCN_bioreactor_t3_biofilm_scaffold_118083_4
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3094..4722
DNA (1629bp) protein (543aa)
sulfotransferase n=1 Tax=Novosphingobium sp. B-7 RepID=UPI0003B4BB76
TPR domain protein {ECO:0000313|EMBL:GAO53869.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;"
hypothetical protein
2019_SCN_bioreactor_t3_biofilm_scaffold_118083_5
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4816..7818
DNA (3003bp) protein (1001aa)
TonB-dependent receptor n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G7Q7_NOVAD
TonB-dependent receptor {ECO:0000313|EMBL:GAO53868.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;"
TonB-dependent receptor
2019_SCN_bioreactor_t3_biofilm_scaffold_118083_6
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7900..9069)
DNA (1170bp) protein (390aa)
P-hydroxybenzoate hydroxylase {ECO:0000313|EMBL:GAO53866.1}; EC=1.14.13.2 {ECO:0000313|EMBL:GAO53866.1};; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;"
4-hydroxybenzoate 3-monooxygenase (EC:1.14.13.2)
4-hydroxybenzoate 3-monooxygenase n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G5K1_NOVAD
2019_SCN_bioreactor_t3_biofilm_scaffold_118083_7
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9176..10030
DNA (855bp) protein (285aa)
Transcriptional regulator, AraC family n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G5K2_NOVAD
Transcriptional regulator pobR of araC family {ECO:0000313|EMBL:GAO53865.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;"
AraC family transcriptional regulator
2019_SCN_bioreactor_t3_biofilm_scaffold_118083_8
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10299..10856)
DNA (558bp) protein (186aa)
NUDIX hydrolase n=1 Tax=Novosphingobium nitrogenifigens DSM 19370 RepID=F1Z720_9SPHN
MutT/nudix family protein {ECO:0000313|EMBL:GAO53864.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;"
NUDIX hydrolase
Displaying 8 items

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