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2019_SCN_bioreactor_t3_biofilm_scaffold_40301

Search features with annotation key words

Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
2019_SCN_bioreactor_t3_biofilm_scaffold_40301_1
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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283..2622
DNA (2340bp) protein (780aa)
DNA helicase {ECO:0000256|SAAS:SAAS00145970}; EC=3.6.4.12 {ECO:0000256|SAAS:SAAS00145970};; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;"
ATP-dependent DNA helicase, Rep family n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G8T6_NOVAD
ATP-dependent DNA helicase Rep
2019_SCN_bioreactor_t3_biofilm_scaffold_40301_2
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2625..3383)
DNA (759bp) protein (253aa)
Putative ATPase n=1 Tax=Sphingobium sp. AP49 RepID=J2WKP3_9SPHN
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:GAO56236.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;"
ATP-binding protein
2019_SCN_bioreactor_t3_biofilm_scaffold_40301_3
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3435..4841)
DNA (1407bp) protein (469aa)
DEAD/DEAH box helicase n=1 Tax=Novosphingobium sp. B-7 RepID=UPI0003B74749
ATP-dependent RNA helicase atu1833 {ECO:0000313|EMBL:GAO56237.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;"
DEAD/DEAH box helicase-like protein
2019_SCN_bioreactor_t3_biofilm_scaffold_40301_4
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5011..5253)
DNA (243bp) protein (81aa)
Uncharacterized protein n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G8T8_NOVAD
Uncharacterized protein {ECO:0000313|EMBL:GAO56238.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;"
hypothetical protein
2019_SCN_bioreactor_t3_biofilm_scaffold_40301_5
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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5602..7032
DNA (1431bp) protein (477aa)
D-2-hydroxyacid dehydrogenase n=1 Tax=Novosphingobium sp. B-7 RepID=UPI0003B5BF10
D-2-hydroxyglutarate dehydrogenase {ECO:0000313|EMBL:GAO56239.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;"
FAD linked oxidase-like protein
2019_SCN_bioreactor_t3_biofilm_scaffold_40301_6
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7175..7954
DNA (780bp) protein (260aa)
multidrug transporter n=1 Tax=Novosphingobium sp. B-7 RepID=UPI0003B7B771
Peptide transport system permease protein sapC {ECO:0000313|EMBL:GAO56240.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;"
SapC
2019_SCN_bioreactor_t3_biofilm_scaffold_40301_7
unknown

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8752..9438
DNA (687bp) protein (229aa)

This feature has no annotations

2019_SCN_bioreactor_t3_biofilm_scaffold_40301_8
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9495..9881
DNA (387bp) protein (129aa)
Response regulator receiver domain-containing protein n=2 Tax=Novosphingobium nitrogenifigens RepID=F1Z838_9SPHN
Response regulator {ECO:0000313|EMBL:GAO56242.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;"
response regulator receiver domain-containing protein
2019_SCN_bioreactor_t3_biofilm_scaffold_40301_9
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10419..11102
DNA (684bp) protein (228aa)
Haloalkane dehalogenase {ECO:0000256|HAMAP-Rule:MF_01230}; EC=3.8.1.5 {ECO:0000256|HAMAP-Rule:MF_01230};; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;"
haloalkane dehalogenase n=1 Tax=Sandarakinorhabdus sp. AAP62 RepID=UPI0002FBF9F6
haloalkane dehalogenase
Displaying 9 items

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