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2019_SCN_bioreactor_t3_biofilm_scaffold_31915

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Displaying 7 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
2019_SCN_bioreactor_t3_biofilm_scaffold_31915_1
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1..339)
DNA (339bp) protein (113aa)
Putative uncharacterized protein n=1 Tax=Novosphingobium pentaromativorans US6-1 RepID=G6EB70_9SPHN
Major facilitator family transporter {ECO:0000313|EMBL:GAO53311.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;"
MFS transporter
2019_SCN_bioreactor_t3_biofilm_scaffold_31915_2
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(336..1382)
DNA (1047bp) protein (349aa)
2-amino-3-carboxymuconate-6-semialdehyde decarboxylase {ECO:0000313|EMBL:GAO53310.1}; EC=4.1.1.45 {ECO:0000313|EMBL:GAO53310.1};; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;"
aminocarboxymuconate-semialdehyde decarboxylase (EC:4.1.1.45)
Aminocarboxymuconate-semialdehyde decarboxylase n=1 Tax=Novosphingobium sp. PP1Y RepID=F6II05_9SPHN
2019_SCN_bioreactor_t3_biofilm_scaffold_31915_3
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1379..2680)
DNA (1302bp) protein (434aa)
Fumarylacetoacetase {ECO:0000313|EMBL:GAO53309.1}; EC=3.7.1.2 {ECO:0000313|EMBL:GAO53309.1};; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;"
fumarylacetoacetate hydrolase (EC:3.7.1.2)
Fumarylacetoacetate hydrolase n=1 Tax=Novosphingobium sp. PP1Y RepID=F6II04_9SPHN
2019_SCN_bioreactor_t3_biofilm_scaffold_31915_4
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2670..3488)
DNA (819bp) protein (273aa)
Fumarylacetoacetase {ECO:0000313|EMBL:GAO53308.1}; EC=3.7.1.2 {ECO:0000313|EMBL:GAO53308.1};; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;"
Beta-lactamase domain-containing protein n=1 Tax=Novosphingobium sp. PP1Y RepID=F6II03_9SPHN
beta-lactamase domain-containing protein
2019_SCN_bioreactor_t3_biofilm_scaffold_31915_5
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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3608..4249
DNA (642bp) protein (214aa)
TetR family transcriptional regulator n=1 Tax=Novosphingobium sp. PP1Y RepID=F6II02_9SPHN
Transcriptional regulator of tetR family {ECO:0000313|EMBL:GAO53307.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;"
TetR family transcriptional regulator
2019_SCN_bioreactor_t3_biofilm_scaffold_31915_6
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4246..5214)
DNA (969bp) protein (323aa)
5-carboxymethyl-2-hydroxymuconate delta-isomerase (EC:5.3.3.10)
5-carboxymethyl-2-hydroxymuconate delta-isomerase n=1 Tax=Novosphingobium sp. PP1Y RepID=F6II01_9SPHN
Fumarylacetoacetate hydrolase family protein {ECO:0000313|EMBL:GAO53306.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;"
2019_SCN_bioreactor_t3_biofilm_scaffold_31915_7
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5250..5489)
DNA (240bp) protein (80aa)
Salicylate hydroxylase {ECO:0000313|EMBL:GAO53305.1}; EC=1.14.13.1 {ECO:0000313|EMBL:GAO53305.1};; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;"
Putative uncharacterized protein n=1 Tax=Novosphingobium sp. PP1Y RepID=F6II00_9SPHN
hypothetical protein
Displaying 7 items

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