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2019_SCN_bioreactor_t3_biofilm_scaffold_32507

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
2019_SCN_bioreactor_t3_biofilm_scaffold_32507_1
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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3..608
DNA (606bp) protein (202aa)
Glutamate synthase [NADPH] large chain {ECO:0000313|EMBL:GAO54862.1}; EC=1.4.1.13 {ECO:0000313|EMBL:GAO54862.1};; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;"
glutamate synthase (NADH) large subunit (EC:1.4.1.14)
Glutamate synthase (NADH) large subunit n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G3G2_NOVAD
2019_SCN_bioreactor_t3_biofilm_scaffold_32507_2
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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631..2064
DNA (1434bp) protein (478aa)
Glutamate synthase [NADPH] small chain {ECO:0000313|EMBL:GAO54863.1}; EC=1.4.1.13 {ECO:0000313|EMBL:GAO54863.1};; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;"
glutamate synthase (NADH) small subunit (EC:1.4.1.14)
Glutamate synthase (NADH) small subunit n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G3G3_NOVAD
2019_SCN_bioreactor_t3_biofilm_scaffold_32507_3
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2138..2932)
DNA (795bp) protein (265aa)
UPI0003CFA4CE related cluster n=1 Tax=unknown RepID=UPI0003CFA4CE
Uncharacterized protein {ECO:0000313|EMBL:GAO54864.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;"
hypothetical protein
2019_SCN_bioreactor_t3_biofilm_scaffold_32507_4
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3043..3723)
DNA (681bp) protein (227aa)
Uracil-DNA glycosylase {ECO:0000256|HAMAP-Rule:MF_00148, ECO:0000256|RuleBase:RU003780}; Short=UDG {ECO:0000256|HAMAP-Rule:MF_00148};; EC=3.2.2.27 {ECO:0000256|HAMAP-Rule:MF_00148, ECO:0000256|RuleBase:RU003780};; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;"
uracil-DNA glycosylase n=1 Tax=Novosphingobium sp. B-7 RepID=UPI0003B4F7A6
uracil-DNA glycosylase
2019_SCN_bioreactor_t3_biofilm_scaffold_32507_5
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3823..4272
DNA (450bp) protein (150aa)
3'-5' exonuclease n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G387_NOVAD
Ribonuclease D related protein {ECO:0000313|EMBL:GAO54866.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;"
3'-5' exonuclease
2019_SCN_bioreactor_t3_biofilm_scaffold_32507_6
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4283..4927
DNA (645bp) protein (215aa)
Uncharacterized protein n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G388_NOVAD
Uncharacterized protein {ECO:0000313|EMBL:GAO54867.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;"
hypothetical protein
2019_SCN_bioreactor_t3_biofilm_scaffold_32507_7
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4924..5523
DNA (600bp) protein (200aa)
OstA-like protein n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G389_NOVAD
Uncharacterized protein {ECO:0000313|EMBL:GAO54868.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;"
OstA-like protein
2019_SCN_bioreactor_t3_biofilm_scaffold_32507_8
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5558..5959)
DNA (402bp) protein (134aa)
Capsule polysaccharide export protein n=1 Tax=Novosphingobium pentaromativorans US6-1 RepID=G6EKJ9_9SPHN
Capsular polysaccharide export system protein kpsS {ECO:0000313|EMBL:GAO54869.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;"
capsule polysaccharide export protein
2019_SCN_bioreactor_t3_biofilm_scaffold_32507_9
Novosphingobium pentaromativorans, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6520..6951
DNA (432bp) protein (144aa)
Putative uncharacterized protein n=1 Tax=Novosphingobium pentaromativorans US6-1 RepID=G6EKJ8_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:EHJ58180.1}; TaxID=1088721 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium pentaromativorans US6-1.;"
2019_SCN_bioreactor_t3_biofilm_scaffold_32507_10
unknown

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comp(6929..7078)
DNA (150bp) protein (50aa)

This feature has no annotations

Displaying 10 items

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