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2019_SCN_bioreactor_t3_biofilm_scaffold_12208

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Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
2019_SCN_bioreactor_t3_biofilm_scaffold_12208_1
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(68..499)
DNA (432bp) protein (144aa)
Uncharacterized protein {ECO:0000313|EMBL:GAO56641.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;"
2019_SCN_bioreactor_t3_biofilm_scaffold_12208_2
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(525..1229)
DNA (705bp) protein (235aa)
ICC-like phosphoesterase-like protein n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G5A0_NOVAD
Uncharacterized protein {ECO:0000313|EMBL:GAO56640.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;"
ICC-like phosphoesterases-like protein
2019_SCN_bioreactor_t3_biofilm_scaffold_12208_3
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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1274..2131
DNA (858bp) protein (286aa)
Coproporphyrinogen oxidase {ECO:0000256|SAAS:SAAS00122066}; EC=1.3.3.3 {ECO:0000256|SAAS:SAAS00122066};; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;"
coproporphyrinogen III oxidase (EC:1.3.3.3)
Coproporphyrinogen III oxidase n=1 Tax=Novosphingobium nitrogenifigens DSM 19370 RepID=F1Z8C0_9SPHN
2019_SCN_bioreactor_t3_biofilm_scaffold_12208_4
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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2136..2765
DNA (630bp) protein (210aa)
GCN5-related N-acetyltransferase n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G5A2_NOVAD
Histone acetyltransferase HPA2 and related acetyltransferases {ECO:0000313|EMBL:GAO56638.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;"
GCN5-like N-acetyltransferase
2019_SCN_bioreactor_t3_biofilm_scaffold_12208_5
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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2842..4773
DNA (1932bp) protein (644aa)
(p)ppGpp synthetase SpoT/RelA (EC:2.7.6.5)
Putative guanosine-3',5'-bis(Diphosphate) 3'-pyrophosphohydrolase n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2YP18_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:GAO56637.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;"
2019_SCN_bioreactor_t3_biofilm_scaffold_12208_6
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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5054..10672
DNA (5619bp) protein (1873aa)
Conserved repeat domain protein n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4QWA0_BREDI
Uncharacterized protein {ECO:0000313|EMBL:GAO56636.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;"
conserved repeat domain protein
2019_SCN_bioreactor_t3_biofilm_scaffold_12208_7
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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10727..13390
DNA (2664bp) protein (888aa)
Internalin, putative n=1 Tax=Thalassobacter arenae DSM 19593 RepID=S9QQC8_9RHOB
Uncharacterized protein {ECO:0000313|EMBL:GAO56636.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;"
hypothetical protein
2019_SCN_bioreactor_t3_biofilm_scaffold_12208_8
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13396..13512
DNA (117bp) protein (39aa)
Flagellar motor protein {ECO:0000313|EMBL:GAO56635.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;"
Displaying 8 items

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