name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
2019_SCN_bioreactor_t3_biofilm_scaffold_10239_1
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
comp(1..144)
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ABC-type transport system permease component n=1 Tax=Sphingobium japonicum (strain NBRC 101211 / UT26S) RepID=D4Z4A0_SPHJU
Lipoprotein releasing system transmembrane protein lolC {ECO:0000313|EMBL:GAO56154.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;"
ABC-type transport system permease component
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2019_SCN_bioreactor_t3_biofilm_scaffold_10239_2
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
comp(141..1205)
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Secretion protein HylD n=1 Tax=Sphingobium baderi LL03 RepID=T0HX85_9SPHN
Membrane fusion protein {ECO:0000313|EMBL:GAO56155.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;"
HlyD-family secretion protein
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2019_SCN_bioreactor_t3_biofilm_scaffold_10239_3
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(1265..1909)
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Thiamine-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00097}; Short=TP synthase {ECO:0000256|HAMAP-Rule:MF_00097};; Short=TPS {ECO:0000256|HAMAP-Rule:MF_00097};; EC=2.5.1.3 {ECO:0000256|HAMAP-Rule:MF_00097};; Thiamine-phosphate pyrophosphorylase {ECO:0000256|HAMAP-Rule:MF_00097}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;"
thiamine-phosphate pyrophosphorylase (EC:2.5.1.3)
Thiamine-phosphate synthase n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G6X1_NOVAD
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2019_SCN_bioreactor_t3_biofilm_scaffold_10239_4
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
comp(1953..2450)
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Putative uncharacterized protein n=1 Tax=Sphingobium sp. SYK-6 RepID=G2II82_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:GAO56157.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;"
hypothetical protein
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2019_SCN_bioreactor_t3_biofilm_scaffold_10239_5
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
comp(2550..3446)
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Fructose-bisphosphate aldolase class I {ECO:0000313|EMBL:GAO56158.1}; EC=4.1.2.13 {ECO:0000313|EMBL:GAO56158.1};; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;"
fructose-1,6-bisphosphate aldolase (EC:4.1.2.13)
Fructose-bisphosphate aldolase n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G6W9_NOVAD
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2019_SCN_bioreactor_t3_biofilm_scaffold_10239_6
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(3562..4749)
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Phosphoglycerate kinase {ECO:0000256|HAMAP-Rule:MF_00145}; EC=2.7.2.3 {ECO:0000256|HAMAP-Rule:MF_00145};; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;"
pgk; phosphoglycerate kinase (EC:2.7.2.3)
Phosphoglycerate kinase n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=PGK_NOVAD
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2019_SCN_bioreactor_t3_biofilm_scaffold_10239_7
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
comp(4838..5845)
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Glyceraldehyde-3-phosphate dehydrogenase {ECO:0000256|RuleBase:RU361160}; EC=1.2.1.- {ECO:0000256|RuleBase:RU361160};; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;"
glyceraldehyde-3-phosphate dehydrogenase (EC:1.2.1.12)
Glyceraldehyde-3-phosphate dehydrogenase n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G6W6_NOVAD
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2019_SCN_bioreactor_t3_biofilm_scaffold_10239_8
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(5865..7802)
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Transketolase {ECO:0000313|EMBL:GAO56161.1}; EC=2.2.1.1 {ECO:0000313|EMBL:GAO56161.1};; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;"
transketolase (EC:2.2.1.1)
Transketolase n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G6W5_NOVAD
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2019_SCN_bioreactor_t3_biofilm_scaffold_10239_9
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
8008..8223
|
Putative uncharacterized protein n=2 Tax=Novosphingobium nitrogenifigens RepID=F1Z9T3_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:GAO56162.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;"
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2019_SCN_bioreactor_t3_biofilm_scaffold_10239_10
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
8220..8543
|
Uncharacterized protein n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G6W3_NOVAD
Cell division protein ZapA {ECO:0000256|SAAS:SAAS00072473}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;"
hypothetical protein
|
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2019_SCN_bioreactor_t3_biofilm_scaffold_10239_11
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
8750..9364
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5-formyltetrahydrofolate cyclo-ligase {ECO:0000256|RuleBase:RU361279}; EC=6.3.3.2 {ECO:0000256|RuleBase:RU361279};; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;"
Putative 5-formyltetrahydrofolate cyclo-ligase n=1 Tax=Novosphingobium nitrogenifigens DSM 19370 RepID=F1Z9T1_9SPHN
5-formyltetrahydrofolate cyclo-ligase
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2019_SCN_bioreactor_t3_biofilm_scaffold_10239_12
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
9361..9582
|
hypothetical protein n=1 Tax=Novosphingobium sp. B-7 RepID=UPI0003B46A30
Uncharacterized protein {ECO:0000313|EMBL:GAO56165.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;"
hypothetical protein
|
|
2019_SCN_bioreactor_t3_biofilm_scaffold_10239_13
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
10036..10629
|
Thymidylate synthase {ECO:0000256|HAMAP-Rule:MF_00008, ECO:0000256|SAAS:SAAS00215270}; Short=TS {ECO:0000256|HAMAP-Rule:MF_00008};; Short=TSase {ECO:0000256|HAMAP-Rule:MF_00008};; EC=2.1.1.45 {ECO:0000256|HAMAP-Rule:MF_00008};; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;"
thymidylate synthase (EC:2.1.1.45)
Thymidylate synthase n=2 Tax=Sphingomonas aromaticivorans RepID=TYSY_NOVAD
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2019_SCN_bioreactor_t3_biofilm_scaffold_10239_14
Novosphingobium subterraneum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
10763..12094
|
Branched-chain alpha-keto acid dehydrogenase E1 component {ECO:0000313|EMBL:KHS48492.1}; EC=1.2.4.4 {ECO:0000313|EMBL:KHS48492.1};; TaxID=48936 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium subterraneum.;"
branched-chain alpha-keto acid dehydrogenase E1 component (EC:1.2.4.4)
Branched-chain alpha-keto acid dehydrogenase E1 component n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G6V7_NOVAD
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2019_SCN_bioreactor_t3_biofilm_scaffold_10239_15
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
12103..13155
|
Branched-chain alpha-keto acid dehydrogenase, E1 component, beta subunit {ECO:0000313|EMBL:GAO56168.1}; EC=1.2.4.4 {ECO:0000313|EMBL:GAO56168.1};; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;"
branched-chain alpha-keto acid dehydrogenase E1 component (EC:1.2.4.4)
Branched-chain alpha-keto acid dehydrogenase E1 component n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G6V8_NOVAD
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2019_SCN_bioreactor_t3_biofilm_scaffold_10239_16
unknown
|
Not on your lists |
comp(13542..13739)
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This feature has no annotations |
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2019_SCN_bioreactor_t3_biofilm_scaffold_10239_17
Novosphingobium subterraneum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
14167..14586
|
Branched-chain alpha-keto acid dehydrogenase subunit E2 {ECO:0000313|EMBL:KHS48494.1}; EC=2.3.1.168 {ECO:0000313|EMBL:KHS48494.1};; TaxID=48936 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium subterraneum.;"
branched-chain alpha-keto acid dehydrogenase subunit E2 (EC:2.3.1.168)
Branched-chain alpha-keto acid dehydrogenase E2 component n=2 Tax=Sphingomonas aromaticivorans RepID=Q2G6V9_NOVAD
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2019_SCN_bioreactor_t3_biofilm_scaffold_10239_18
Novosphingobium resinovorum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
14646..15227
|
Uncharacterized protein n=1 Tax=Sphingomonas sp. LH128 RepID=J8SBR5_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:EZP84749.1}; TaxID=158500 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium resinovorum.;"
hypothetical protein
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2019_SCN_bioreactor_t3_biofilm_scaffold_10239_19
Novosphingobium nitrogenifigens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(15234..15677)
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Putative uncharacterized protein n=1 Tax=Novosphingobium nitrogenifigens DSM 19370 RepID=F1Z9S9_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:EGD58663.1}; TaxID=983920 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium nitrogenifigens DSM 19370.;"
hypothetical protein
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