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2019_SCN_bioreactor_t3_biofilm_scaffold_82374

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Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
2019_SCN_bioreactor_t3_biofilm_scaffold_82374_1
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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3..524
DNA (522bp) protein (174aa)
Uncharacterized protein n=1 Tax=Asticcacaulis sp. AC460 RepID=V4PX10_9CAUL
Uncharacterized protein {ECO:0000313|EMBL:GAO55965.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;"
2019_SCN_bioreactor_t3_biofilm_scaffold_82374_2
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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769..1293
DNA (525bp) protein (175aa)
Cyclic pyranopterin monophosphate synthase accessory protein n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=MOAC_NOVAD
Cyclic pyranopterin monophosphate synthase accessory protein {ECO:0000256|HAMAP-Rule:MF_01224}; Molybdenum cofactor biosynthesis protein C {ECO:0000256|HAMAP-Rule:MF_01224}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;"
GTP cyclohydrolase subunit MoaC
2019_SCN_bioreactor_t3_biofilm_scaffold_82374_3
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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1290..2495
DNA (1206bp) protein (402aa)
Molybdopterin molybdochelatase n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G6Q6_NOVAD
Molybdopterin biosynthesis protein moeA {ECO:0000313|EMBL:GAO55963.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;"
molybdopterin molybdochelatase
2019_SCN_bioreactor_t3_biofilm_scaffold_82374_4
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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2553..3245
DNA (693bp) protein (231aa)
LexA repressor {ECO:0000256|HAMAP-Rule:MF_00015, ECO:0000256|SAAS:SAAS00008101}; EC=3.4.21.88 {ECO:0000256|HAMAP-Rule:MF_00015};; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;"
LexA repressor (EC:3.4.21.88)
LexA repressor n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=LEXA_NOVAD
2019_SCN_bioreactor_t3_biofilm_scaffold_82374_5
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3239..5455)
DNA (2217bp) protein (739aa)
ComEC/Rec2-related protein n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G6Q4_NOVAD
DNA internalization-related competence protein comEC/rec2 {ECO:0000313|EMBL:GAO55961.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;"
ComEC/Rec2-like protein
2019_SCN_bioreactor_t3_biofilm_scaffold_82374_6
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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5485..6963
DNA (1479bp) protein (493aa)
Glutamate--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00022}; EC=6.1.1.17 {ECO:0000256|HAMAP-Rule:MF_00022};; Glutamyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00022}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;"
glutamyl-tRNA synthetase (EC:6.1.1.17)
glutamyl-tRNA synthetase n=1 Tax=Novosphingobium sp. B-7 RepID=UPI0003B7023A
2019_SCN_bioreactor_t3_biofilm_scaffold_82374_7
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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7030..7989
DNA (960bp) protein (320aa)
citrate synthase (EC:2.3.3.1)
type II citrate synthase n=1 Tax=Novosphingobium sp. B-7 RepID=UPI0003B5F261
Citrate synthase {ECO:0000256|PIRNR:PIRNR001369}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;"
2019_SCN_bioreactor_t3_biofilm_scaffold_82374_8
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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8097..8294
DNA (198bp) protein (66aa)
Uncharacterized protein n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G6Q1_NOVAD
Uncharacterized protein {ECO:0000313|EMBL:GAO55957.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;"
hypothetical protein
2019_SCN_bioreactor_t3_biofilm_scaffold_82374_9
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8302..9579)
DNA (1278bp) protein (426aa)
histidine kinase (EC:2.7.3.-)
histidine kinase n=1 Tax=Novosphingobium sp. B-7 RepID=UPI0003B75E8B
Two-component signal transduction histidine kinase {ECO:0000313|EMBL:GAO55956.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;"
Displaying 9 items

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