name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
2019_SCN_bioreactor_t3_biofilm_scaffold_100582_1
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
3..1238
|
potassium transporter n=1 Tax=Sphingomonas-like bacterium B12 RepID=UPI0003B6CE70
Cation:proton antiporter {ECO:0000313|EMBL:GAO53061.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;"
putative Na+/H+ antiporter
|
|
2019_SCN_bioreactor_t3_biofilm_scaffold_100582_2
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(1260..3200)
|
Acetyl-CoA carboxylase n=1 Tax=Sphingobium ummariense RL-3 RepID=T0IU65_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:GAO53060.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;"
acetyl-CoA carboxylase, biotin carboxylase
|
|
2019_SCN_bioreactor_t3_biofilm_scaffold_100582_3
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(3226..4629)
|
Alpha-galactosidase {ECO:0000313|EMBL:GAO53059.1}; EC=3.2.1.22 {ECO:0000313|EMBL:GAO53059.1};; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;"
Alpha-galactosidase n=1 Tax=Caulobacter sp. (strain K31) RepID=B0SVS1_CAUSK
alpha-galactosidase
|
|
2019_SCN_bioreactor_t3_biofilm_scaffold_100582_4
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(5060..6085)
|
esterase n=1 Tax=Sphingomonas sp. PAMC 26605 RepID=UPI00026CDD59
Uncharacterized protein {ECO:0000313|EMBL:GAO53058.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;"
putative esterase
|
|
2019_SCN_bioreactor_t3_biofilm_scaffold_100582_5
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(6156..8531)
|
Alpha/beta hydrolase domain-containing protein n=1 Tax=Novosphingobium sp. PP1Y RepID=F6ICQ4_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:GAO53057.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;"
alpha/beta hydrolase
|
|
2019_SCN_bioreactor_t3_biofilm_scaffold_100582_6
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(8557..10122)
|
Alpha-N-arabinofuranosidase 2 {ECO:0000313|EMBL:GAO53056.1}; EC=3.2.1.55 {ECO:0000313|EMBL:GAO53056.1};; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;"
alpha-L-arabinofuranosidase n=1 Tax=Sphingomonas echinoides RepID=UPI00026CD490
alpha-N-arabinofuranosidase
|
|
2019_SCN_bioreactor_t3_biofilm_scaffold_100582_7
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(10221..11510)
|
Dihydroxy-acid dehydratase {ECO:0000313|EMBL:GAO53055.1}; EC=4.2.1.9 {ECO:0000313|EMBL:GAO53055.1};; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;"
dihydroxy-acid dehydratase (EC:4.2.1.9)
Dihydroxy-acid dehydratase n=1 Tax=Novosphingobium lindaniclasticum LE124 RepID=T0J7G5_9SPHN
|
|
2019_SCN_bioreactor_t3_biofilm_scaffold_100582_8
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(11532..12029)
|
Dihydroxy-acid dehydratase {ECO:0000313|EMBL:GAO53055.1}; EC=4.2.1.9 {ECO:0000313|EMBL:GAO53055.1};; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;"
dihydroxyacid dehydratase (EC:4.2.1.9)
dihydroxy-acid dehydratase n=1 Tax=Novosphingobium sp. B-7 RepID=UPI0003B5DEDF
|
|
2019_SCN_bioreactor_t3_biofilm_scaffold_100582_9
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(12062..13273)
|
Aldose 1-epimerase {ECO:0000256|PIRNR:PIRNR005096}; EC=5.1.3.3 {ECO:0000256|PIRNR:PIRNR005096};; Galactose mutarotase {ECO:0000256|PIRNR:PIRNR005096}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;"
aldose 1-epimerase n=1 Tax=Novosphingobium sp. B-7 RepID=UPI0003B529FD
aldose 1-epimerase
|
|
2019_SCN_bioreactor_t3_biofilm_scaffold_100582_10
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
13374..14687
|
MFS transporter n=1 Tax=Sphingobium quisquiliarum P25 RepID=T0H3H3_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:GAO53053.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;"
fucP; L-fucose permease
|
|
2019_SCN_bioreactor_t3_biofilm_scaffold_100582_11
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
14779..16305
|
Ketoglutarate semialdehyde dehydrogenase {ECO:0000313|EMBL:GAO53052.1}; EC=1.2.1.26 {ECO:0000313|EMBL:GAO53052.1};; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;"
Aldehyde dehydrogenase n=1 Tax=Novosphingobium sp. PP1Y RepID=F6ICS8_9SPHN
aldehyde dehydrogenase
|
|
2019_SCN_bioreactor_t3_biofilm_scaffold_100582_12
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
16329..17330
|
Fumarylacetoacetate (FAA) hydrolase family protein n=1 Tax=Sphingomonas sp. S17 RepID=F3WX09_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:GAO53051.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;"
hypothetical protein
|
|
2019_SCN_bioreactor_t3_biofilm_scaffold_100582_13
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
17335..18261
|
D-galactose 1-dehydrogenase n=1 Tax=Sphingomonas sp. LH128 RepID=J8VI10_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:GAO53050.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;"
D-galactose 1-dehydrogenase
|
|
2019_SCN_bioreactor_t3_biofilm_scaffold_100582_14
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
18427..19539
|
xylan 1,4-beta-xylosidase (EC:3.2.1.37)
Glycosyl hydrolases 43 family protein n=1 Tax=Sphingomonas sp. S17 RepID=F3WSK8_9SPHN
Xylosidase/arabinosidase {ECO:0000313|EMBL:GAO53049.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;"
|
|
2019_SCN_bioreactor_t3_biofilm_scaffold_100582_15
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
19546..20994
|
Xylulose kinase {ECO:0000313|EMBL:GAO53048.1}; EC=2.7.1.17 {ECO:0000313|EMBL:GAO53048.1};; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;"
xylulokinase (EC:2.7.1.17)
Xylulokinase n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2GAC0_NOVAD
|
|
2019_SCN_bioreactor_t3_biofilm_scaffold_100582_16
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
21002..22309
|
Xylose isomerase {ECO:0000256|HAMAP-Rule:MF_00455, ECO:0000256|RuleBase:RU000609}; EC=5.3.1.5 {ECO:0000256|HAMAP-Rule:MF_00455, ECO:0000256|RuleBase:RU000609};; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;"
xylose isomerase (EC:5.3.1.5)
UPI0003CFD755 related cluster n=1 Tax=unknown RepID=UPI0003CFD755
|
|
2019_SCN_bioreactor_t3_biofilm_scaffold_100582_17
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
22349..23050
|
acetyl xylan esterase n=1 Tax=Sphingomonas sp. PAMC 26617 RepID=UPI0002884AFB
Acetyl xylan esterase {ECO:0000313|EMBL:GAO53046.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;"
acetyl xylan esterase
|
|
2019_SCN_bioreactor_t3_biofilm_scaffold_100582_18
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
23062..24507
|
Arabinan endo-1,5-alpha-L-arabinosidase {ECO:0000313|EMBL:GAO53045.1}; EC=3.2.1.99 {ECO:0000313|EMBL:GAO53045.1};; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;"
glycoside hydrolase n=1 Tax=Sphingomonas sp. PAMC 26617 RepID=UPI000289E23C
glycoside hydrolase
|
|
2019_SCN_bioreactor_t3_biofilm_scaffold_100582_19
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
24608..25348
|
GntR family transcriptional regulator n=1 Tax=Sphingomonas-like bacterium B12 RepID=UPI0003B49EF1
Transcriptional regulator of gntR family {ECO:0000313|EMBL:GAO53044.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;"
GntR family transcriptional regulator
|
|
2019_SCN_bioreactor_t3_biofilm_scaffold_100582_20
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(25367..26878)
|
Endo-1,4-beta-xylanase A {ECO:0000313|EMBL:GAO53043.1}; EC=3.2.1.8 {ECO:0000313|EMBL:GAO53043.1};; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;"
glycoside hydrolase family protein n=1 Tax=Sphingomonas sp. PAMC 26605 RepID=UPI00026CDD52
glycoside hydrolase family protein
|
|
2019_SCN_bioreactor_t3_biofilm_scaffold_100582_21
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(26875..29538)
|
Beta-glucosidase {ECO:0000313|EMBL:GAO53042.1}; EC=3.2.1.21 {ECO:0000313|EMBL:GAO53042.1};; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;"
putative beta-glucosidase (EC:3.2.1.21)
UPI0003D5E2ED related cluster n=1 Tax=unknown RepID=UPI0003D5E2ED
|
|
2019_SCN_bioreactor_t3_biofilm_scaffold_100582_22
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(29630..31192)
|
Tryptophan halogenase n=1 Tax=Caulobacter segnis (strain ATCC 21756 / DSM 7131 / JCM 7823 / NBRC 15250 / LMG 17158 / TK0059) RepID=D5VGN3_CAUST
Uncharacterized protein {ECO:0000313|EMBL:GAO53041.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;"
tryptophan halogenase
|
|
2019_SCN_bioreactor_t3_biofilm_scaffold_100582_23
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(31272..33926)
|
TonB-denpendent receptor n=1 Tax=Sphingobium ummariense RL-3 RepID=T0KBB8_9SPHN
N-acetylglucosamine-regulated tonB-dependent outer membrane receptor {ECO:0000313|EMBL:GAO53040.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;"
TonB-dependent receptor
|
|
2019_SCN_bioreactor_t3_biofilm_scaffold_100582_24
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
34388..35080
|
multidrug transporter n=1 Tax=Caulobacter sp. JGI 0001013-D04 RepID=UPI00036B7E0C
SapC-like S-layer protein {ECO:0000313|EMBL:GAO53039.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;"
hypothetical protein
|
|
2019_SCN_bioreactor_t3_biofilm_scaffold_100582_25
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
35086..36096
|
transcription factor jumonji jmjC domain-containing protein n=1 Tax=Sphingomonas sp. PAMC 26617 RepID=UPI000289A4B3
Pass1-related protein {ECO:0000313|EMBL:GAO53038.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;"
transcription factor jumonji jmjC domain-containing protein
|
|
2019_SCN_bioreactor_t3_biofilm_scaffold_100582_26
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(36215..37630)
|
MFS transporter, SP family, sugar:H+ symporter n=1 Tax=Novosphingobium sp. PP1Y RepID=F6ICR5_9SPHN
D-xylose proton-symporter xylE {ECO:0000313|EMBL:GAO53037.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;"
MFS transporter SP family sugar:H+ symporter
|
|
2019_SCN_bioreactor_t3_biofilm_scaffold_100582_27
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
37873..38877
|
LacI family transcriptional regulator n=1 Tax=Novosphingobium sp. PP1Y RepID=F6ICR6_9SPHN
Transcriptional regulator of lacI family {ECO:0000313|EMBL:GAO53036.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;"
LacI family transcriptional regulator
|
|
2019_SCN_bioreactor_t3_biofilm_scaffold_100582_28
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria
|
Not on your lists |
39045..39707
|
Uncharacterized protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CZT6_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EDY20250.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
|
|
2019_SCN_bioreactor_t3_biofilm_scaffold_100582_29
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(39855..41759)
|
exported putative sialate O-acetylesterase (EC:3.1.1.53)
Exported putative sialate O-acetylesterase n=1 Tax=Novosphingobium sp. PP1Y RepID=F6ICR7_9SPHN
Sialic acid-specific 9-O-acetylesterase {ECO:0000313|EMBL:GAO53035.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;"
|
|
2019_SCN_bioreactor_t3_biofilm_scaffold_100582_30
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(41756..42652)
|
Xylonolactonase {ECO:0000313|EMBL:GAO53034.1}; EC=3.1.1.68 {ECO:0000313|EMBL:GAO53034.1};; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;"
Gluconolactonase n=1 Tax=Novosphingobium sp. PP1Y RepID=F6ICR8_9SPHN
gluconolactonase
|