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2019_SCN_bioreactor_t3_biofilm_scaffold_149803

Search features with annotation key words

Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
2019_SCN_bioreactor_t3_biofilm_scaffold_149803_1
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3..659)
DNA (657bp) protein (219aa)
Threonine dehydratase, catabolic {ECO:0000313|EMBL:GAO55708.1}; EC=4.3.1.19 {ECO:0000313|EMBL:GAO55708.1};; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;"
Pyridoxal-5'-phosphate-dependent enzyme, beta subunit n=1 Tax=Novosphingobium nitrogenifigens DSM 19370 RepID=F1ZA70_9SPHN
pyridoxal-5'-phosphate-dependent protein subunit beta
2019_SCN_bioreactor_t3_biofilm_scaffold_149803_2
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

735..1946
DNA (1212bp) protein (404aa)
Saccharopine dehydrogenase n=1 Tax=Novosphingobium nitrogenifigens DSM 19370 RepID=F1ZA69_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:GAO55709.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;"
saccharopine dehydrogenase
2019_SCN_bioreactor_t3_biofilm_scaffold_149803_3
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1946..2308
DNA (363bp) protein (121aa)
Uncharacterized protein n=1 Tax=Novosphingobium sp. AP12 RepID=J3AJJ8_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:GAO55710.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;"
hypothetical protein
2019_SCN_bioreactor_t3_biofilm_scaffold_149803_4
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2585..3778
DNA (1194bp) protein (398aa)
Carboxynorspermidine/carboxyspermidine decarboxylase {ECO:0000256|PIRNR:PIRNR038941}; Short=CANS DC/CAS DC {ECO:0000256|PIRNR:PIRNR038941};; Short=CANSDC/CASDC {ECO:0000256|PIRNR:PIRNR038941};; EC=4.1.1.96 {ECO:0000256|PIRNR:PIRNR038941};; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;"
Carboxynorspermidine/carboxyspermidine decarboxylase n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G7E1_NOVAD
Orn/DAP/Arg decarboxylase 2
2019_SCN_bioreactor_t3_biofilm_scaffold_149803_5
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3831..5057
DNA (1227bp) protein (409aa)
6-aminohexanoate-dimer hydrolase (EC:3.5.1.46)
6-aminohexanoate-dimer hydrolase n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G7E0_NOVAD
Beta-lactamase class C and other penicillin binding proteins {ECO:0000313|EMBL:GAO55712.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;"
2019_SCN_bioreactor_t3_biofilm_scaffold_149803_6
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5240..6124
DNA (885bp) protein (295aa)
Orn/DAP/Arg decarboxylase 2 n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G7D9_NOVAD
Uncharacterized protein {ECO:0000313|EMBL:GAO55714.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;"
Orn/DAP/Arg decarboxylase 2
2019_SCN_bioreactor_t3_biofilm_scaffold_149803_7
unknown

Not on your lists

comp(5983..6291)
DNA (309bp) protein (103aa)

This feature has no annotations

2019_SCN_bioreactor_t3_biofilm_scaffold_149803_8
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6294..9206)
DNA (2913bp) protein (971aa)
TonB-dependent receptor n=1 Tax=Novosphingobium pentaromativorans US6-1 RepID=G6E8I9_9SPHN
TonB-dependent receptor {ECO:0000313|EMBL:GAO55715.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;"
TonB-dependent receptor
2019_SCN_bioreactor_t3_biofilm_scaffold_149803_9
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9402..10583)
DNA (1182bp) protein (394aa)
Diguanylate cyclase n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G5F6_NOVAD
Uncharacterized protein {ECO:0000313|EMBL:GAO55716.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;"
diguanylate cyclase
Displaying 9 items

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