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2019_SCN_bioreactor_t3_biofilm_scaffold_163755

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Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
2019_SCN_bioreactor_t3_biofilm_scaffold_163755_1
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2..808)
DNA (807bp) protein (269aa)
methyl-accepting chemotaxis protein n=1 Tax=Novosphingobium sp. B-7 RepID=UPI0003B6AE11
Methyl-accepting chemotaxis protein {ECO:0000313|EMBL:GAO56192.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;"
methyl-accepting chemotaxis sensory transducer
2019_SCN_bioreactor_t3_biofilm_scaffold_163755_2
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(962..2089)
DNA (1128bp) protein (376aa)
DNA polymerase III subunit beta {ECO:0000256|PIRNR:PIRNR000804}; EC=2.7.7.7 {ECO:0000256|PIRNR:PIRNR000804};; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;"
DNA polymerase III subunit beta (EC:2.7.7.7)
DNA polymerase III subunit beta n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G8F0_NOVAD
2019_SCN_bioreactor_t3_biofilm_scaffold_163755_3
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2328..2873)
DNA (546bp) protein (182aa)
hypothetical protein n=1 Tax=Novosphingobium nitrogenifigens RepID=UPI000369874F
Uncharacterized protein {ECO:0000313|EMBL:GAO56194.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;"
2019_SCN_bioreactor_t3_biofilm_scaffold_163755_4
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2879..3643)
DNA (765bp) protein (255aa)
3-oxoacyl-[acyl-carrier protein] reductase {ECO:0000313|EMBL:GAO56195.1}; EC=1.1.1.100 {ECO:0000313|EMBL:GAO56195.1};; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;"
3-oxoacyl-[acyl-carrier-protein] reductase (EC:1.1.1.100)
3-oxoacyl-[acyl-carrier-protein] reductase n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G8F1_NOVAD
2019_SCN_bioreactor_t3_biofilm_scaffold_163755_5
Novosphingobium sp. AP12, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3695..4087)
DNA (393bp) protein (131aa)
Uncharacterized protein n=1 Tax=Novosphingobium sp. AP12 RepID=J2GPW7_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:EJL24823.1}; TaxID=1144305 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. AP12.;"
Fe3+ hydroxamate ABC transporter substrate-binding protein
2019_SCN_bioreactor_t3_biofilm_scaffold_163755_6
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4135..5070)
DNA (936bp) protein (312aa)
Malonyl CoA-acyl carrier protein transacylase {ECO:0000256|PIRNR:PIRNR000446}; EC=2.3.1.39 {ECO:0000256|PIRNR:PIRNR000446};; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;"
[acyl-carrier-protein] S-malonyltransferase (EC:2.3.1.39)
Malonyl CoA-acyl carrier protein transacylase n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G8F2_NOVAD
2019_SCN_bioreactor_t3_biofilm_scaffold_163755_7
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5118..5975)
DNA (858bp) protein (286aa)
MuramoylteTRAPeptide carboxypeptidase {ECO:0000313|EMBL:GAO56197.1}; EC=3.4.17.13 {ECO:0000313|EMBL:GAO56197.1};; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;"
Peptidase U61, LD-carboxypeptidase A n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G8F3_NOVAD
peptidase U61, LD-carboxypeptidase A
2019_SCN_bioreactor_t3_biofilm_scaffold_163755_8
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6063..7112
DNA (1050bp) protein (350aa)
UDP-N-acetylmuramate--alanine ligase {ECO:0000313|EMBL:GAO56199.1}; EC=6.3.2.8 {ECO:0000313|EMBL:GAO56199.1};; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;"
UDP-N-acetylmuramate--L-alanine ligase (EC:6.3.2.8)
UDP-N-acetylmuramate--alanine ligase n=1 Tax=Novosphingobium sp. B-7 RepID=UPI0003B587F2
Displaying 8 items

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