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2019_SCN_bioreactor_t3_biofilm_scaffold_164504

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Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
2019_SCN_bioreactor_t3_biofilm_scaffold_164504_1
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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1..1140
DNA (1140bp) protein (380aa)
Protease II {ECO:0000313|EMBL:GAO54034.1}; EC=3.4.21.83 {ECO:0000313|EMBL:GAO54034.1};; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;"
oligopeptidase B (EC:3.4.21.83)
Oligopeptidase B, Serine peptidase, MEROPS family S09A n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2GB88_NOVAD
2019_SCN_bioreactor_t3_biofilm_scaffold_164504_2
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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1151..1561
DNA (411bp) protein (137aa)
Thioesterase-like protein n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2GB89_NOVAD
Uncharacterized protein {ECO:0000313|EMBL:GAO54035.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;"
thioesterase-like protein
2019_SCN_bioreactor_t3_biofilm_scaffold_164504_3
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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1697..1894
DNA (198bp) protein (66aa)
hypothetical protein n=1 Tax=Novosphingobium sp. B-7 RepID=UPI0003B61EA8
Uncharacterized protein {ECO:0000313|EMBL:GAO54036.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;"
hypothetical protein
2019_SCN_bioreactor_t3_biofilm_scaffold_164504_4
unknown

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1891..2172
DNA (282bp) protein (94aa)

This feature has no annotations

2019_SCN_bioreactor_t3_biofilm_scaffold_164504_5
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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2169..2471
DNA (303bp) protein (101aa)
Uncharacterized protein n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G3R2_NOVAD
Uncharacterized protein {ECO:0000313|EMBL:GAO54038.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;"
hypothetical protein
2019_SCN_bioreactor_t3_biofilm_scaffold_164504_6
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2510..3118)
DNA (609bp) protein (203aa)
Diguanylate cyclase n=1 Tax=Novosphingobium pentaromativorans US6-1 RepID=G6ECA7_9SPHN
GGDEF/PAS/PAC-domain containing protein {ECO:0000313|EMBL:GAO54039.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;"
diguanylate cyclase
2019_SCN_bioreactor_t3_biofilm_scaffold_164504_7
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3146..4219)
DNA (1074bp) protein (358aa)
Putative diguanylate cyclase (GGDEF) n=1 Tax=Erythrobacter sp. NAP1 RepID=A3WH61_9SPHN
GGDEF/PAS/PAC-domain containing protein {ECO:0000313|EMBL:GAO54039.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;"
diguanylate cyclase
2019_SCN_bioreactor_t3_biofilm_scaffold_164504_8
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4259..4660)
DNA (402bp) protein (134aa)
Alanine dehydrogenase {ECO:0000256|PIRNR:PIRNR000183}; EC=1.4.1.1 {ECO:0000256|PIRNR:PIRNR000183};; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;"
L-alanine dehydrogenase (EC:1.4.1.1)
Alanine dehydrogenase n=1 Tax=Novosphingobium lindaniclasticum LE124 RepID=T0I245_9SPHN
Displaying 8 items

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