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2019_SCN_bioreactor_t3_biofilm_scaffold_174602

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Displaying 7 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
2019_SCN_bioreactor_t3_biofilm_scaffold_174602_1
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(324..1154)
DNA (831bp) protein (277aa)
Methionine aminopeptidase {ECO:0000256|HAMAP-Rule:MF_01974}; Short=MAP {ECO:0000256|HAMAP-Rule:MF_01974};; Short=MetAP {ECO:0000256|HAMAP-Rule:MF_01974};; EC=3.4.11.18 {ECO:0000256|HAMAP-Rule:MF_01974};; Peptidase M {ECO:0000256|HAMAP-Rule:MF_01974}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;"
methionine aminopeptidase, type I (EC:3.4.11.18)
methionine aminopeptidase n=1 Tax=Novosphingobium sp. B-7 RepID=UPI0003B4A48E
2019_SCN_bioreactor_t3_biofilm_scaffold_174602_2
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1192..2046)
DNA (855bp) protein (285aa)
Uncharacterized protein n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G9B7_NOVAD
Uncharacterized protein {ECO:0000313|EMBL:GAO57003.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;"
hypothetical protein
2019_SCN_bioreactor_t3_biofilm_scaffold_174602_3
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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2065..3351
DNA (1287bp) protein (429aa)
Peptidase B {ECO:0000313|EMBL:GAO57002.1}; EC=3.4.11.23 {ECO:0000313|EMBL:GAO57002.1};; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;"
leucyl aminopeptidase (EC:3.4.11.1)
Leucyl aminopeptidase n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G9B6_NOVAD
2019_SCN_bioreactor_t3_biofilm_scaffold_174602_4
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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3386..3823
DNA (438bp) protein (146aa)
Uncharacterized protein n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2ZVR1_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:GAO57001.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;"
hypothetical protein
2019_SCN_bioreactor_t3_biofilm_scaffold_174602_5
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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3820..4749
DNA (930bp) protein (310aa)
N-acetyl-gamma-glutamyl-phosphate reductase {ECO:0000256|HAMAP-Rule:MF_01110}; Short=AGPR {ECO:0000256|HAMAP-Rule:MF_01110};; EC=1.2.1.38 {ECO:0000256|HAMAP-Rule:MF_01110};; N-acetyl-glutamate semialdehyde dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01110}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;"
N-acetyl-gamma-glutamyl-phosphate reductase (EC:1.2.1.38)
N-acetyl-gamma-glutamyl-phosphate reductase n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G9B4_NOVAD
2019_SCN_bioreactor_t3_biofilm_scaffold_174602_6
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4907..5224)
DNA (318bp) protein (106aa)
Ferredoxin n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G9B3_NOVAD
Ferredoxin, 2Fe-2S {ECO:0000313|EMBL:GAO56999.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;"
ferredoxin
2019_SCN_bioreactor_t3_biofilm_scaffold_174602_7
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5340..5957
DNA (618bp) protein (206aa)
DNA-3-methyladenine glycosylase II {ECO:0000313|EMBL:GAO56998.1}; EC=3.2.2.21 {ECO:0000313|EMBL:GAO56998.1};; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;"
HhH-GPD n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G9B2_NOVAD
HhH-GPD
Displaying 7 items

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