ggKbase home page

2019_SCN_bioreactor_t3_biofilm_scaffold_187937

Search features with annotation key words

Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
2019_SCN_bioreactor_t3_biofilm_scaffold_187937_1
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1..696
DNA (696bp) protein (232aa)
RNA procession exonuclease-like protein n=1 Tax=Novosphingobium lindaniclasticum LE124 RepID=T0ILD7_9SPHN
mRNA 3-end processing factor {ECO:0000313|EMBL:GAO54292.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;"
mRNA 3-end processing factor
2019_SCN_bioreactor_t3_biofilm_scaffold_187937_2
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

726..2345
DNA (1620bp) protein (540aa)
ATP-dependent DNA ligase ligC {ECO:0000313|EMBL:GAO54293.1}; EC=6.5.1.1 {ECO:0000313|EMBL:GAO54293.1};; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;"
ATP-dependent DNA ligase (EC:6.5.1.1)
DNA ligase (ATP) n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2GCA6_NOVAD
2019_SCN_bioreactor_t3_biofilm_scaffold_187937_3
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2441..2857
DNA (417bp) protein (139aa)
globin n=1 Tax=Novosphingobium sp. B-7 RepID=UPI0003B59CC0
Hemoglobin-like protein HbO {ECO:0000313|EMBL:GAO54294.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;"
globin
2019_SCN_bioreactor_t3_biofilm_scaffold_187937_4
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2947..3717
DNA (771bp) protein (257aa)
Putative uncharacterized protein n=1 Tax=Novosphingobium nitrogenifigens DSM 19370 RepID=F1ZAG3_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:GAO54295.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;"
hypothetical protein
2019_SCN_bioreactor_t3_biofilm_scaffold_187937_5
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3743..4381
DNA (639bp) protein (213aa)
Uncharacterized protein n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2GCA4_NOVAD
Uncharacterized protein {ECO:0000313|EMBL:GAO54296.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;"
hypothetical protein
2019_SCN_bioreactor_t3_biofilm_scaffold_187937_6
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4436..7243)
DNA (2808bp) protein (936aa)
TonB-dependent receptor n=1 Tax=Sphingomonas sp. KC8 RepID=UPI0002488E8D
Uncharacterized protein {ECO:0000313|EMBL:GAO54297.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;"
TonB-dependent receptor
2019_SCN_bioreactor_t3_biofilm_scaffold_187937_7
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7468..8310
DNA (843bp) protein (281aa)
Cyanophycinase {ECO:0000313|EMBL:GAO54298.1}; EC=3.4.15.6 {ECO:0000313|EMBL:GAO54298.1};; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;"
peptidase t2 asparaginase 2 n=1 Tax=Sphingomonas sp. KC8 RepID=UPI0002488A11
peptidase T
2019_SCN_bioreactor_t3_biofilm_scaffold_187937_8
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8343..8801
DNA (459bp) protein (153aa)
AsnC family transcriptional regulator n=1 Tax=Sphingomonas sp. KC8 RepID=UPI0002488A10
Uncharacterized protein {ECO:0000313|EMBL:GAO54299.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;"
transcriptional regulator, trmb
2019_SCN_bioreactor_t3_biofilm_scaffold_187937_9
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8908..9504
DNA (597bp) protein (199aa)
Putative salt-induced outer membrane protein n=1 Tax=Novosphingobium nitrogenifigens DSM 19370 RepID=F1Z3A4_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:GAO54300.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;"
hypothetical protein
Displaying 9 items

View Taxonomy