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2019_SCN_bioreactor_t3_biofilm_scaffold_188446

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Displaying 7 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
2019_SCN_bioreactor_t3_biofilm_scaffold_188446_1
Sphingobium indicum, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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3..320
DNA (318bp) protein (106aa)
Lytic transglycosylase, catalytic n=1 Tax=Sphingobium indicum B90A RepID=I5B9G7_9SPHN
Lytic transglycosylase, catalytic {ECO:0000313|EMBL:EIM66219.1}; TaxID=861109 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium indicum B90A.;"
lytic transglycosylase catalytic subunit
2019_SCN_bioreactor_t3_biofilm_scaffold_188446_2
Novosphingobium aromaticivorans, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(408..1679)
DNA (1272bp) protein (424aa)
Phage integrase n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G674_NOVAD
phage integrase
Phage integrase {ECO:0000313|EMBL:ABD26649.1}; TaxID=279238 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium aromaticivorans (strain DSM 12444 / F199).;"
2019_SCN_bioreactor_t3_biofilm_scaffold_188446_3
unknown

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comp(1818..1949)
DNA (132bp) protein (44aa)

This feature has no annotations

2019_SCN_bioreactor_t3_biofilm_scaffold_188446_4
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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2199..2786
DNA (588bp) protein (196aa)
TadE-like protein n=1 Tax=Novosphingobium nitrogenifigens DSM 19370 RepID=F1Z4A9_9SPHN
Similar to tadZ/cpaE, associated with Flp pilus assembly {ECO:0000313|EMBL:GAO56464.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;"
hypothetical protein
2019_SCN_bioreactor_t3_biofilm_scaffold_188446_5
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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2786..3382
DNA (597bp) protein (199aa)
TadE family protein n=1 Tax=Novosphingobium nitrogenifigens DSM 19370 RepID=F1Z4A8_9SPHN
Mll5590 protein {ECO:0000313|EMBL:GAO56465.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;"
hypothetical protein
2019_SCN_bioreactor_t3_biofilm_scaffold_188446_6
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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3397..4980
DNA (1584bp) protein (528aa)
Putative uncharacterized protein n=1 Tax=Novosphingobium nitrogenifigens DSM 19370 RepID=F1Z4A7_9SPHN
Blr3941 {ECO:0000313|EMBL:GAO56466.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;"
hypothetical protein
2019_SCN_bioreactor_t3_biofilm_scaffold_188446_7
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5152..5382)
DNA (231bp) protein (77aa)
Uncharacterized protein n=1 Tax=Sphingopyxis sp. MC1 RepID=N9W337_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:GAO56467.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;"
hypothetical protein
Displaying 7 items

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