name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
2019_SCN_bioreactor_t3_biofilm_scaffold_215859_1
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(3..311)
|
Beta-ketoadipate enol-lactone hydrolase {ECO:0000313|EMBL:GAO56762.1}; EC=3.1.1.24 {ECO:0000313|EMBL:GAO56762.1};; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;"
Beta-ketoadipate enol-lactone hydrolase (EC:3.1.1.24)
alpha/beta hydrolase n=1 Tax=Cupriavidus sp. WS RepID=UPI000382C10F
|
|
2019_SCN_bioreactor_t3_biofilm_scaffold_215859_2
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
494..769
|
Uncharacterized protein {ECO:0000313|EMBL:GAO56761.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;"
|
|
2019_SCN_bioreactor_t3_biofilm_scaffold_215859_3
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
916..1629
|
Two component transcriptional regulator, winged helix family n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G518_NOVAD
Two-component response regulator {ECO:0000313|EMBL:GAO56759.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;"
two component transcriptional regulator
|
|
2019_SCN_bioreactor_t3_biofilm_scaffold_215859_4
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
1668..2960
|
Periplasmic sensor signal transduction histidine kinase n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G519_NOVAD
Sensor histidine kinase {ECO:0000313|EMBL:GAO56758.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;"
periplasmic sensor signal transduction histidine kinase
|
|
2019_SCN_bioreactor_t3_biofilm_scaffold_215859_5
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
3086..3781
|
Carbonic anhydrase {ECO:0000313|EMBL:GAO56757.1}; EC=4.2.1.1 {ECO:0000313|EMBL:GAO56757.1};; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;"
carbonate dehydratase (EC:4.2.1.1)
Carbonic anhydrase n=1 Tax=Novosphingobium nitrogenifigens DSM 19370 RepID=F1Z8W8_9SPHN
|
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2019_SCN_bioreactor_t3_biofilm_scaffold_215859_6
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
3778..5313
|
Sulphate transporter n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G521_NOVAD
Sulfate transporter family protein in cluster with carbonic anhydrase {ECO:0000313|EMBL:GAO56756.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;"
sulfate transporter
|
|
2019_SCN_bioreactor_t3_biofilm_scaffold_215859_7
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
5449..6924
|
D-alanyl-D-alanine carboxypeptidase {ECO:0000313|EMBL:GAO56755.1}; EC=3.4.16.4 {ECO:0000313|EMBL:GAO56755.1};; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;"
penicillin-binding protein n=1 Tax=Sphingomonas echinoides RepID=UPI00026CC3A6
penicillin-binding protein
|
|
2019_SCN_bioreactor_t3_biofilm_scaffold_215859_8
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
7027..7398
|
Glyoxalase/bleomycin resistance protein/dioxygenase n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G465_NOVAD
Lactoylglutathione lyase and related lyases {ECO:0000313|EMBL:GAO56754.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;"
glyoxalase/bleomycin resistance protein/dioxygenase
|
|
2019_SCN_bioreactor_t3_biofilm_scaffold_215859_9
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
7403..8254
|
S-formylglutathione hydrolase {ECO:0000313|EMBL:GAO56753.1}; EC=3.1.2.12 {ECO:0000313|EMBL:GAO56753.1};; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;"
carboxylesterase (EC:3.1.1.1)
Carboxylesterase n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G466_NOVAD
|
|
2019_SCN_bioreactor_t3_biofilm_scaffold_215859_10
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(8312..8773)
|
N utilization substance protein B homolog n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=NUSB_NOVAD
N utilization substance protein B homolog {ECO:0000256|HAMAP-Rule:MF_00073, ECO:0000256|SAAS:SAAS00057003}; Short=Protein NusB {ECO:0000256|HAMAP-Rule:MF_00073};; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;"
NusB antitermination factor
|
|
2019_SCN_bioreactor_t3_biofilm_scaffold_215859_11
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(8770..10059)
|
Histidinol dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01024, ECO:0000256|PIRNR:PIRNR000099}; Short=HDH {ECO:0000256|HAMAP-Rule:MF_01024, ECO:0000256|PIRNR:PIRNR000099};; EC=1.1.1.23 {ECO:0000256|HAMAP-Rule:MF_01024, ECO:0000256|PIRNR:PIRNR000099};; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;"
hisD; histidinol dehydrogenase (EC:1.1.1.23)
Histidinol dehydrogenase n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G468_NOVAD
|
|
2019_SCN_bioreactor_t3_biofilm_scaffold_215859_12
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(10059..10742)
|
ATP phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_01018, ECO:0000256|SAAS:SAAS00008790}; Short=ATP-PRT {ECO:0000256|HAMAP-Rule:MF_01018};; Short=ATP-PRTase {ECO:0000256|HAMAP-Rule:MF_01018};; EC=2.4.2.17 {ECO:0000256|HAMAP-Rule:MF_01018, ECO:0000256|SAAS:SAAS00046302};; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;"
hisG; ATP phosphoribosyltransferase (EC:2.4.2.17)
ATP phosphoribosyltransferase n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=HIS1_NOVAD
|
|
2019_SCN_bioreactor_t3_biofilm_scaffold_215859_13
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
10793..11875
|
Uncharacterized protein n=1 Tax=Sphingopyxis sp. MC1 RepID=N9WH23_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:GAO56749.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;"
hypothetical protein
|
|
2019_SCN_bioreactor_t3_biofilm_scaffold_215859_14
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(11904..13127)
|
membrane protein n=1 Tax=Novosphingobium sp. B-7 RepID=UPI0003B51F9A
Transmembrane protein {ECO:0000313|EMBL:GAO56748.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;"
putative membrane protein; putative LtrA domain (Low temperature requirement A protein )
|
|
2019_SCN_bioreactor_t3_biofilm_scaffold_215859_15
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(13120..14031)
|
Alpha/beta hydrolase fold {ECO:0000313|EMBL:GAO56747.1}; EC=3.8.1.5 {ECO:0000313|EMBL:GAO56747.1};; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;"
Alpha/beta hydrolase n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G471_NOVAD
alpha/beta hydrolase
|
|
2019_SCN_bioreactor_t3_biofilm_scaffold_215859_16
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(14037..14861)
|
Short-chain dehydrogenase/reductase SDR n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G472_NOVAD
Oxidoreductase of short-chain dehydrogenase/reductase family {ECO:0000313|EMBL:GAO56746.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;"
short-chain dehydrogenase/reductase SDR
|
|
2019_SCN_bioreactor_t3_biofilm_scaffold_215859_17
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(14916..15386)
|
Putative MutT/nudix-family hydrolase n=1 Tax=Erythrobacter litoralis (strain HTCC2594) RepID=Q2NCH3_ERYLH
Uncharacterized protein {ECO:0000313|EMBL:GAO56745.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;"
MutT/NUDIX family hydrolase
|
|
2019_SCN_bioreactor_t3_biofilm_scaffold_215859_18
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(15383..15655)
|
BolA family transcriptional regulator n=1 Tax=Novosphingobium sp. B-7 RepID=UPI0003B37A9B
Cell division protein bolA {ECO:0000313|EMBL:GAO56744.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;"
transcriptional regulator BolA
|
|
2019_SCN_bioreactor_t3_biofilm_scaffold_215859_19
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
15696..16286
|
Heat shock protein DnaJ-like protein n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G478_NOVAD
Uncharacterized protein {ECO:0000313|EMBL:GAO56743.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;"
molecular chaperone DnaJ
|
|
2019_SCN_bioreactor_t3_biofilm_scaffold_215859_20
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(16293..17117)
|
VacJ-like lipoprotein n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G8M0_NOVAD
VacJ-like lipoprotein {ECO:0000313|EMBL:GAO56742.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;"
VacJ-like lipoprotein
|
|
2019_SCN_bioreactor_t3_biofilm_scaffold_215859_21
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(17297..17743)
|
hypothetical protein n=1 Tax=Sphingomonas sp. PAMC 26605 RepID=UPI00026CD747
Uncharacterized protein {ECO:0000313|EMBL:GAO56741.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;"
hypothetical protein
|
|
2019_SCN_bioreactor_t3_biofilm_scaffold_215859_22
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(17828..19561)
|
Phosphoenolpyruvate carboxykinase [ATP] {ECO:0000256|HAMAP-Rule:MF_00453}; Short=PCK {ECO:0000256|HAMAP-Rule:MF_00453};; Short=PEP carboxykinase {ECO:0000256|HAMAP-Rule:MF_00453};; Short=PEPCK {ECO:0000256|HAMAP-Rule:MF_00453};; EC=4.1.1.49 {ECO:0000256|HAMAP-Rule:MF_00453};; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;"
phosphoenolpyruvate carboxykinase (EC:4.1.1.49)
Phosphoenolpyruvate carboxykinase [ATP] n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=PCKA_NOVAD
|
|
2019_SCN_bioreactor_t3_biofilm_scaffold_215859_23
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
19717..19836
|
DNA-binding response regulator chvI {ECO:0000313|EMBL:GAO56739.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;"
|