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2019_SCN_bioreactor_t3_planktonic_scaffold_33560

Search features with annotation key words

Displaying items 1-30 of 31 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
2019_SCN_bioreactor_t3_planktonic_scaffold_33560_1
Azospirillum lipoferum, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

356..1087
DNA (732bp) protein (244aa)
Transcriptional regulator n=1 Tax=Azospirillum sp. (strain B510) RepID=D3P2C1_AZOS1
transcriptional regulator
Transcriptional regulator {ECO:0000313|EMBL:BAI74941.1}; TaxID=137722 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum sp. (strain B510).;"
2019_SCN_bioreactor_t3_planktonic_scaffold_33560_2
Azospirillum lipoferum, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1361..2272
DNA (912bp) protein (304aa)
5-dehydro-4-deoxyglucarate dehydratase (EC:4.2.1.41)
Probable 5-dehydro-4-deoxyglucarate dehydratase {ECO:0000256|HAMAP-Rule:MF_00694}; EC=4.2.1.41 {ECO:0000256|HAMAP-Rule:MF_00694};; 5-keto-4-deoxy-glucarate dehydratase {ECO:0000256|HAMAP-Rule:MF_00694}; TaxID=137722 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum sp. (strain B510).;"
Probable 5-dehydro-4-deoxyglucarate dehydratase n=1 Tax=Azospirillum sp. (strain B510) RepID=D3P2C2_AZOS1
2019_SCN_bioreactor_t3_planktonic_scaffold_33560_3
Azospirillum lipoferum, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2436..3851
DNA (1416bp) protein (472aa)
Glucarate transporter n=1 Tax=Azospirillum sp. (strain B510) RepID=D3P2C3_AZOS1
gudP; glucarate transporter
Glucarate transporter {ECO:0000313|EMBL:BAI74943.1}; TaxID=137722 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum sp. (strain B510).;"
2019_SCN_bioreactor_t3_planktonic_scaffold_33560_4
Azospirillum lipoferum, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3932..5002
DNA (1071bp) protein (357aa)
Mannonate dehydratase {ECO:0000256|SAAS:SAAS00189414}; EC=4.2.1.8 {ECO:0000256|SAAS:SAAS00189414};; TaxID=137722 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum sp. (strain B510).;"
Mannonate dehydratase n=1 Tax=Azospirillum sp. (strain B510) RepID=D3P026_AZOS1
mannonate dehydratase
2019_SCN_bioreactor_t3_planktonic_scaffold_33560_5
Azospirillum lipoferum, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5044..6381
DNA (1338bp) protein (446aa)
gudD; glucarate dehydratase (EC:4.2.1.40)
Glucarate dehydratase {ECO:0000313|EMBL:BAI74001.1}; EC=4.2.1.40 {ECO:0000313|EMBL:BAI74001.1};; TaxID=137722 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum sp. (strain B510).;"
Glucarate dehydratase n=1 Tax=Azospirillum sp. (strain B510) RepID=D3P022_AZOS1
2019_SCN_bioreactor_t3_planktonic_scaffold_33560_6
Azospirillum lipoferum, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6554..8077
DNA (1524bp) protein (508aa)
garD; galactarate dehydratase (EC:4.2.1.42)
Galactarate dehydratase {ECO:0000313|EMBL:BAI74944.1}; EC=4.2.1.42 {ECO:0000313|EMBL:BAI74944.1};; TaxID=137722 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum sp. (strain B510).;"
Galactarate dehydratase n=1 Tax=Azospirillum sp. (strain B510) RepID=D3P2C4_AZOS1
2019_SCN_bioreactor_t3_planktonic_scaffold_33560_7
Bradyrhizobium sp. YR681, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8187..9287
DNA (1101bp) protein (367aa)
3-carboxymuconate cyclase n=1 Tax=Bradyrhizobium sp. YR681 RepID=J3I1F9_9BRAD
3-carboxymuconate cyclase {ECO:0000313|EMBL:EJN12346.1}; Flags: Precursor;; TaxID=1144344 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. YR681.;"
hypothetical protein
2019_SCN_bioreactor_t3_planktonic_scaffold_33560_8
Azospirillum lipoferum, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9319..10200)
DNA (882bp) protein (294aa)
Inner membrane transporter n=1 Tax=Azospirillum sp. (strain B510) RepID=D3P2D0_AZOS1
inner membrane transporter
Inner membrane transporter {ECO:0000313|EMBL:BAI74950.1}; TaxID=137722 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum sp. (strain B510).;"
2019_SCN_bioreactor_t3_planktonic_scaffold_33560_9
Azospirillum lipoferum, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10309..10806
DNA (498bp) protein (166aa)
Transcriptional regulator n=1 Tax=Azospirillum sp. (strain B510) RepID=D3P2D1_AZOS1
transcriptional regulator
Transcriptional regulator {ECO:0000313|EMBL:BAI74951.1}; TaxID=137722 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum sp. (strain B510).;"
2019_SCN_bioreactor_t3_planktonic_scaffold_33560_10
unknown

Not on your lists

comp(10820..11926)
DNA (1107bp) protein (369aa)

This feature has no annotations

2019_SCN_bioreactor_t3_planktonic_scaffold_33560_11
Azospirillum lipoferum, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12097..13083
DNA (987bp) protein (329aa)
Pyridoxal 4-dehydrogenase {ECO:0000313|EMBL:CBS89745.1}; EC=1.1.1.107 {ECO:0000313|EMBL:CBS89745.1};; TaxID=862719 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum lipoferum (strain 4B).;"
Pyridoxal 4-dehydrogenase n=1 Tax=Azospirillum lipoferum (strain 4B) RepID=G7ZCY8_AZOL4
pyridoxal 4-dehydrogenase
2019_SCN_bioreactor_t3_planktonic_scaffold_33560_12
Azospirillum lipoferum, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13090..14064)
DNA (975bp) protein (325aa)
Uncharacterized protein n=1 Tax=Azospirillum sp. (strain B510) RepID=D3P2D2_AZOS1
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAI74952.1}; TaxID=137722 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum sp. (strain B510).;"
2019_SCN_bioreactor_t3_planktonic_scaffold_33560_13
Azospirillum lipoferum, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14194..15396
DNA (1203bp) protein (401aa)
exodeoxyribonuclease V (EC:3.1.11.5)
Exodeoxyribonuclease V {ECO:0000313|EMBL:BAI74953.1}; EC=3.1.11.5 {ECO:0000313|EMBL:BAI74953.1};; TaxID=137722 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum sp. (strain B510).;"
Exodeoxyribonuclease V n=1 Tax=Azospirillum sp. (strain B510) RepID=D3P2D3_AZOS1
2019_SCN_bioreactor_t3_planktonic_scaffold_33560_14
Azospirillum lipoferum, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15521..16609
DNA (1089bp) protein (363aa)
Uncharacterized protein n=1 Tax=Azospirillum sp. (strain B510) RepID=D3P2D4_AZOS1
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAI74954.1}; TaxID=137722 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum sp. (strain B510).;"
2019_SCN_bioreactor_t3_planktonic_scaffold_33560_15
Azospirillum lipoferum, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16821..17150
DNA (330bp) protein (110aa)
SSU ribosomal protein S30P / sigma 54 modulation protein n=1 Tax=Azospirillum sp. (strain B510) RepID=D3P2D5_AZOS1
SSU ribosomal protein S30P / sigma 54 modulation protein
SSU ribosomal protein S30P / sigma 54 modulation protein {ECO:0000313|EMBL:BAI74955.1}; TaxID=137722 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum sp. (strain B510).;"
2019_SCN_bioreactor_t3_planktonic_scaffold_33560_16
Azospirillum thiophilum, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17322..18128
DNA (807bp) protein (269aa)
Sigma factor sigB regulation protein rsbQ n=2 Tax=Medicago truncatula RepID=G7JCS9_MEDTR
Uncharacterized protein {ECO:0000313|EMBL:KJR61588.1}; TaxID=528244 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum thiophilum.;"
alpha/beta hydrolase
2019_SCN_bioreactor_t3_planktonic_scaffold_33560_17
Azospirillum lipoferum, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18345..19298
DNA (954bp) protein (318aa)
Transcriptional regulator n=1 Tax=Azospirillum sp. (strain B510) RepID=D3P2D8_AZOS1
transcriptional regulator
Transcriptional regulator {ECO:0000313|EMBL:BAI74958.1}; TaxID=137722 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum sp. (strain B510).;"
2019_SCN_bioreactor_t3_planktonic_scaffold_33560_18
Azospirillum lipoferum, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19441..24486
DNA (5046bp) protein (1682aa)
Two-component sensor histidine kinase n=1 Tax=Azospirillum sp. (strain B510) RepID=D3P2D9_AZOS1
Two-component sensor histidine kinase {ECO:0000313|EMBL:BAI74959.1}; TaxID=137722 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum sp. (strain B510).;"
two-component sensor histidine kinase
2019_SCN_bioreactor_t3_planktonic_scaffold_33560_19
Azospirillum lipoferum, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24483..26009
DNA (1527bp) protein (509aa)
Two-component hybrid sensor and regulator n=1 Tax=Azospirillum sp. (strain B510) RepID=D3P2E0_AZOS1
two-component hybrid sensor and regulator
Two-component hybrid sensor and regulator {ECO:0000313|EMBL:BAI74960.1}; TaxID=137722 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum sp. (strain B510).;"
2019_SCN_bioreactor_t3_planktonic_scaffold_33560_20
Azospirillum lipoferum, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26009..26653
DNA (645bp) protein (215aa)
Two-component response regulator n=1 Tax=Azospirillum sp. (strain B510) RepID=D3P2E1_AZOS1
two-component response regulator
Two-component response regulator {ECO:0000313|EMBL:BAI74961.1}; TaxID=137722 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum sp. (strain B510).;"
2019_SCN_bioreactor_t3_planktonic_scaffold_33560_21
unknown

Not on your lists

comp(26707..27072)
DNA (366bp) protein (122aa)
Flagelliform silk protein (Fragment) n=1 Tax=Nephila clavipes RepID=Q9NHW3_NEPCL
2019_SCN_bioreactor_t3_planktonic_scaffold_33560_22
Anabaena variabilis, Anabaena, Nostocales, Cyanobacteria, Bacteria

Not on your lists

comp(27181..27795)
DNA (615bp) protein (205aa)
Putative Ig n=1 Tax=Anabaena variabilis (strain ATCC 29413 / PCC 7937) RepID=Q3M813_ANAVT
Ig family protein
Putative Ig {ECO:0000313|EMBL:ABA22873.1}; TaxID=240292 species="Bacteria; Cyanobacteria; Nostocales; Nostocaceae; Anabaena.;" source="Anabaena variabilis (strain ATCC 29413 / PCC 7937).;"
2019_SCN_bioreactor_t3_planktonic_scaffold_33560_23
Azospirillum lipoferum, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28144..28581)
DNA (438bp) protein (146aa)
Uncharacterized protein n=1 Tax=Azospirillum lipoferum (strain 4B) RepID=G7ZCT0_AZOL4
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBS89606.1}; TaxID=862719 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum lipoferum (strain 4B).;"
2019_SCN_bioreactor_t3_planktonic_scaffold_33560_24
Azospirillum lipoferum, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28619..29182)
DNA (564bp) protein (188aa)
Putative fructose-2,6-bisphosphatase n=1 Tax=Azospirillum lipoferum (strain 4B) RepID=G7ZCS7_AZOL4
putative fructose-2,6-bisphosphatase
Putative fructose-2,6-bisphosphatase {ECO:0000313|EMBL:CBS89600.1}; TaxID=862719 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum lipoferum (strain 4B).;"
2019_SCN_bioreactor_t3_planktonic_scaffold_33560_25
unknown

Not on your lists

29255..29413
DNA (159bp) protein (53aa)

This feature has no annotations

2019_SCN_bioreactor_t3_planktonic_scaffold_33560_26
Azospirillum thiophilum, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29416..30246)
DNA (831bp) protein (277aa)
Uncharacterized protein n=1 Tax=Rhizobium sp. CF122 RepID=J3BLY2_9RHIZ
Short-chain dehydrogenase {ECO:0000313|EMBL:KJR61858.1}; TaxID=528244 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum thiophilum.;"
short chain dehydrogenase
2019_SCN_bioreactor_t3_planktonic_scaffold_33560_27
Azospirillum thiophilum, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30354..31361
DNA (1008bp) protein (336aa)
LysR family transcriptional regulator (EC:4.2.1.1)
LysR family transcriptional regulator n=1 Tax=Rhizobium grahamii CCGE 502 RepID=S3HWF9_9RHIZ
LysR family transcriptional regulator {ECO:0000313|EMBL:KJR61857.1}; TaxID=528244 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum thiophilum.;"
2019_SCN_bioreactor_t3_planktonic_scaffold_33560_28
Azospirillum lipoferum, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

31422..33077
DNA (1656bp) protein (552aa)
Peptidase C14 n=1 Tax=Azospirillum sp. (strain B510) RepID=D3P2E5_AZOS1
peptidase C14
Peptidase C14 {ECO:0000313|EMBL:BAI74965.1}; TaxID=137722 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum sp. (strain B510).;"
2019_SCN_bioreactor_t3_planktonic_scaffold_33560_29
Azospirillum lipoferum, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

33195..34280
DNA (1086bp) protein (362aa)
Uncharacterized protein n=1 Tax=Azospirillum sp. (strain B510) RepID=D3P2E6_AZOS1
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAI74966.1}; TaxID=137722 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum sp. (strain B510).;"
2019_SCN_bioreactor_t3_planktonic_scaffold_33560_30
Azospirillum thiophilum, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(34308..34553)
DNA (246bp) protein (82aa)
Uncharacterized protein n=1 Tax=Azospirillum lipoferum (strain 4B) RepID=G7ZCS4_AZOL4
Uncharacterized protein {ECO:0000313|EMBL:KJR61851.1}; TaxID=528244 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum thiophilum.;"
hypothetical protein
Displaying items 1-30 of 31 in total

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