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2019_SCN_bioreactor_t3_planktonic_scaffold_103380

Search features with annotation key words

Displaying items 1-30 of 91 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
2019_SCN_bioreactor_t3_planktonic_scaffold_103380_1
Azospirillum lipoferum, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1..279)
DNA (279bp) protein (93aa)
Branched-chain amino acid transport system permease protein n=1 Tax=Azospirillum sp. (strain B510) RepID=D3P6F5_AZOS1
livH; branched-chain amino acid transport system permease protein
Branched-chain amino acid transport system permease protein {ECO:0000313|EMBL:BAI76234.1}; TaxID=137722 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum sp. (strain B510).;"
2019_SCN_bioreactor_t3_planktonic_scaffold_103380_2
Azospirillum lipoferum, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(666..1439)
DNA (774bp) protein (258aa)
Uncharacterized protein n=1 Tax=Azospirillum lipoferum (strain 4B) RepID=G7ZI60_AZOL4
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBS91168.1}; TaxID=862719 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum lipoferum (strain 4B).;"
2019_SCN_bioreactor_t3_planktonic_scaffold_103380_3
Azospirillum lipoferum, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1717..2709
DNA (993bp) protein (331aa)
scrK; fructokinase (EC:2.7.1.4)
Fructokinase {ECO:0000313|EMBL:BAI76624.1}; EC=2.7.1.4 {ECO:0000313|EMBL:BAI76624.1};; TaxID=137722 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum sp. (strain B510).;"
Fructokinase n=1 Tax=Azospirillum sp. (strain B510) RepID=D3P7J5_AZOS1
2019_SCN_bioreactor_t3_planktonic_scaffold_103380_4
Azospirillum lipoferum, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2720..3127)
DNA (408bp) protein (136aa)
Uncharacterized protein n=1 Tax=Azospirillum sp. (strain B510) RepID=D3P7J6_AZOS1
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAI76625.1}; TaxID=137722 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum sp. (strain B510).;"
2019_SCN_bioreactor_t3_planktonic_scaffold_103380_5
Azospirillum lipoferum, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3283..4974)
DNA (1692bp) protein (564aa)
Putative glycosyl transferase, family 39 n=1 Tax=Azospirillum lipoferum (strain 4B) RepID=G7ZHV9_AZOL4
putative glycosyl transferase, family 39
Putative glycosyl transferase, family 39 {ECO:0000313|EMBL:CBS91171.1}; TaxID=862719 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum lipoferum (strain 4B).;"
2019_SCN_bioreactor_t3_planktonic_scaffold_103380_6
Azospirillum thiophilum, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4971..5306)
DNA (336bp) protein (112aa)
Lipid-A-disaccharide synthase n=1 Tax=Azospirillum sp. (strain B510) RepID=D3P7J8_AZOS1
Lipid A biosynthesis {ECO:0000313|EMBL:KJR62508.1}; TaxID=528244 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum thiophilum.;"
lipid-A-disaccharide synthase
2019_SCN_bioreactor_t3_planktonic_scaffold_103380_7
Azospirillum thiophilum, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5344..6105)
DNA (762bp) protein (254aa)
dpm1; dolichol-phosphate mannosyltransferase (EC:2.4.1.83)
Dolichol-phosphate mannosyltransferase n=1 Tax=Azospirillum sp. (strain B510) RepID=D3P7J9_AZOS1
Glycosyl transferase {ECO:0000313|EMBL:KJR62509.1}; TaxID=528244 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum thiophilum.;"
2019_SCN_bioreactor_t3_planktonic_scaffold_103380_8
Azospirillum lipoferum, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6220..7818)
DNA (1599bp) protein (533aa)
Serine endoprotease DegP-like {ECO:0000313|EMBL:CBS91174.1}; EC=3.4.21.- {ECO:0000313|EMBL:CBS91174.1};; TaxID=862719 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum lipoferum (strain 4B).;"
Serine endoprotease DegP-like n=1 Tax=Azospirillum lipoferum (strain 4B) RepID=G7ZI64_AZOL4
serine endoprotease DegP-like
2019_SCN_bioreactor_t3_planktonic_scaffold_103380_9
Azospirillum lipoferum, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8224..9093
DNA (870bp) protein (290aa)
Uncharacterized protein n=1 Tax=Azospirillum lipoferum (strain 4B) RepID=G7ZI65_AZOL4
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBS91175.1}; TaxID=862719 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum lipoferum (strain 4B).;"
2019_SCN_bioreactor_t3_planktonic_scaffold_103380_10
Azospirillum lipoferum, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9417..11285)
DNA (1869bp) protein (623aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=137722 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum sp. (strain B510).;"
Two-component sensor histidine kinase n=1 Tax=Azospirillum sp. (strain B510) RepID=D3P7K5_AZOS1
two-component sensor histidine kinase
2019_SCN_bioreactor_t3_planktonic_scaffold_103380_11
unknown

Not on your lists

11552..11833
DNA (282bp) protein (94aa)

This feature has no annotations

2019_SCN_bioreactor_t3_planktonic_scaffold_103380_12
Azospirillum lipoferum, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11983..13500
DNA (1518bp) protein (506aa)
4Fe-4S ferredoxin, iron-sulfur binding n=1 Tax=Azospirillum sp. (strain B510) RepID=D3P7K7_AZOS1
4Fe-4S ferredoxin, iron-sulfur binding
4Fe-4S ferredoxin, iron-sulfur binding {ECO:0000313|EMBL:BAI76636.1}; TaxID=137722 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum sp. (strain B510).;"
2019_SCN_bioreactor_t3_planktonic_scaffold_103380_13
Azospirillum lipoferum, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13706..14263
DNA (558bp) protein (186aa)
Uncharacterized protein n=1 Tax=Azospirillum lipoferum (strain 4B) RepID=G7ZI68_AZOL4
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBS91180.1}; TaxID=862719 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum lipoferum (strain 4B).;"
2019_SCN_bioreactor_t3_planktonic_scaffold_103380_14
Azospirillum lipoferum, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14441..14611
DNA (171bp) protein (57aa)
Uncharacterized protein n=1 Tax=Azospirillum lipoferum (strain 4B) RepID=G7ZI69_AZOL4
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBS91181.1}; TaxID=862719 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum lipoferum (strain 4B).;"
2019_SCN_bioreactor_t3_planktonic_scaffold_103380_15
Azospirillum lipoferum, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14636..15802)
DNA (1167bp) protein (389aa)
Cytochrome c peroxidase {ECO:0000313|EMBL:CBS91182.1}; EC=1.11.1.5 {ECO:0000313|EMBL:CBS91182.1};; TaxID=862719 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum lipoferum (strain 4B).;"
Cytochrome c peroxidase n=1 Tax=Azospirillum lipoferum (strain 4B) RepID=G7ZHW2_AZOL4
cytochrome c peroxidase
2019_SCN_bioreactor_t3_planktonic_scaffold_103380_16
Azospirillum lipoferum, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15957..16802)
DNA (846bp) protein (282aa)
Putative uroporphyrinogen-III synthase {ECO:0000313|EMBL:CBS91183.1}; EC=4.2.1.75 {ECO:0000313|EMBL:CBS91183.1};; TaxID=862719 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum lipoferum (strain 4B).;"
Putative uroporphyrinogen-III synthase n=1 Tax=Azospirillum lipoferum (strain 4B) RepID=G7ZHW3_AZOL4
putative uroporphyrinogen-III synthase
2019_SCN_bioreactor_t3_planktonic_scaffold_103380_17
Azospirillum lipoferum, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16948..17568)
DNA (621bp) protein (207aa)
Putative N-methyltransferase phosphatidylethanolamine or menaquinone biosynthesis methyltransferase (UbiE) {ECO:0000313|EMBL:CBS91184.1}; EC=2.1.1.- {ECO:0000313|EMBL:CBS91184.1};; TaxID=862719 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum lipoferum (strain 4B).;"
Putative N-methyltransferase phosphatidylethanolamine or menaquinone biosynthesis methyltransferase (UbiE) n=1 Tax=Azospirillum lipoferum (strain 4B) RepID=G7ZI70_AZOL4
putative N-methyltransferase; phosphatidylethanolamine or menaquinone biosynthesis methyltransferase (ubiE)
2019_SCN_bioreactor_t3_planktonic_scaffold_103380_18
Azospirillum thiophilum, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17873..19693
DNA (1821bp) protein (607aa)
Two-component sensor histidine kinase n=1 Tax=Azospirillum sp. (strain B510) RepID=D3P7L2_AZOS1
Uncharacterized protein {ECO:0000313|EMBL:KJR62521.1}; TaxID=528244 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum thiophilum.;"
two-component sensor histidine kinase
2019_SCN_bioreactor_t3_planktonic_scaffold_103380_19
Azospirillum lipoferum, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19701..21083
DNA (1383bp) protein (461aa)
Two-component response regulator n=1 Tax=Azospirillum sp. (strain B510) RepID=D3P7L3_AZOS1
two-component response regulator
Two-component response regulator {ECO:0000313|EMBL:BAI76642.1}; TaxID=137722 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum sp. (strain B510).;"
2019_SCN_bioreactor_t3_planktonic_scaffold_103380_20
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21097..22797)
DNA (1701bp) protein (567aa)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PHR9_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS41091.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
membrane protein
2019_SCN_bioreactor_t3_planktonic_scaffold_103380_21
Azospirillum lipoferum, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23003..23479
DNA (477bp) protein (159aa)
HTH-type transcriptional regulator n=1 Tax=Azospirillum sp. (strain B510) RepID=D3P7L5_AZOS1
HTH-type transcriptional regulator
HTH-type transcriptional regulator {ECO:0000313|EMBL:BAI76644.1}; TaxID=137722 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum sp. (strain B510).;"
2019_SCN_bioreactor_t3_planktonic_scaffold_103380_22
Azospirillum lipoferum, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23464..25089
DNA (1626bp) protein (542aa)
Acyl-CoA synthetase {ECO:0000313|EMBL:CBS91187.1}; EC=6.2.1.- {ECO:0000313|EMBL:CBS91187.1};; TaxID=862719 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum lipoferum (strain 4B).;"
Acyl-CoA synthetase n=1 Tax=Azospirillum lipoferum (strain 4B) RepID=G7ZI73_AZOL4
alkK; acyl-CoA synthetase
2019_SCN_bioreactor_t3_planktonic_scaffold_103380_23
RLO_Gammaproteobacteria_47_11, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25132..25647)
DNA (516bp) protein (172aa)
Uncharacterized protein n=1 Tax=Delftia acidovorans CCUG 274B RepID=S2WGT9_DELAC
prophage CP4-57 regulatory
Tax=RifCSPlowO2_12_Gammaproteobacteria_47_11_curated
2019_SCN_bioreactor_t3_planktonic_scaffold_103380_24
Azospirillum lipoferum, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26237..27730)
DNA (1494bp) protein (498aa)
glpK; glycerol kinase (EC:2.7.1.30)
Glycerol kinase {ECO:0000256|HAMAP-Rule:MF_00186, ECO:0000256|SAAS:SAAS00029376}; EC=2.7.1.30 {ECO:0000256|HAMAP-Rule:MF_00186, ECO:0000256|SAAS:SAAS00029376};; ATP:glycerol 3-phosphotransferase {ECO:0000256|HAMAP-Rule:MF_00186}; Glycerokinase {ECO:0000256|HAMAP-Rule:MF_00186}; TaxID=137722 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum sp. (strain B510).;"
Glycerol kinase n=1 Tax=Azospirillum sp. (strain B510) RepID=D3P7L7_AZOS1
2019_SCN_bioreactor_t3_planktonic_scaffold_103380_25
Azospirillum lipoferum, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28025..29788)
DNA (1764bp) protein (588aa)
Putative sugar ABC transporter substrate-binding periplasmic component n=1 Tax=Azospirillum lipoferum (strain 4B) RepID=G7ZHW4_AZOL4
putative sugar ABC transporter; substrate-binding periplasmic component
Putative sugar ABC transporter substrate-binding periplasmic component {ECO:0000313|EMBL:CBS91189.1}; TaxID=862719 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum lipoferum (strain 4B).;"
2019_SCN_bioreactor_t3_planktonic_scaffold_103380_26
Azospirillum thiophilum, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29923..30201)
DNA (279bp) protein (93aa)
Uncharacterized protein n=1 Tax=Azospirillum lipoferum (strain 4B) RepID=G7ZHW5_AZOL4
Membrane protein {ECO:0000313|EMBL:KJR62732.1}; TaxID=528244 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum thiophilum.;"
hypothetical protein
2019_SCN_bioreactor_t3_planktonic_scaffold_103380_27
Azospirillum lipoferum, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30215..31084)
DNA (870bp) protein (290aa)
Multiple sugar transport system permease protein n=1 Tax=Azospirillum sp. (strain B510) RepID=D3P7M0_AZOS1
multiple sugar transport system permease protein
Multiple sugar transport system permease protein {ECO:0000313|EMBL:BAI76649.1}; TaxID=137722 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum sp. (strain B510).;"
2019_SCN_bioreactor_t3_planktonic_scaffold_103380_28
Azospirillum lipoferum, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31081..31956)
DNA (876bp) protein (292aa)
Multiple sugar transport system permease protein n=1 Tax=Azospirillum sp. (strain B510) RepID=D3P7M1_AZOS1
multiple sugar transport system permease protein
Multiple sugar transport system permease protein {ECO:0000313|EMBL:BAI76650.1}; TaxID=137722 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum sp. (strain B510).;"
2019_SCN_bioreactor_t3_planktonic_scaffold_103380_29
Azospirillum lipoferum, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31949..33040)
DNA (1092bp) protein (364aa)
Putative sugar ABC transporter ATP-binding component n=1 Tax=Azospirillum lipoferum (strain 4B) RepID=G7ZI77_AZOL4
putative sugar ABC transporter; ATP-binding component
Putative sugar ABC transporter ATP-binding component {ECO:0000313|EMBL:CBS91193.1}; TaxID=862719 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum lipoferum (strain 4B).;"
2019_SCN_bioreactor_t3_planktonic_scaffold_103380_30
Azospirillum lipoferum, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(33055..34158)
DNA (1104bp) protein (368aa)
Multiple sugar transport system ATP-binding protein n=1 Tax=Azospirillum sp. (strain B510) RepID=D3P7M3_AZOS1
multiple sugar transport system ATP-binding protein
Multiple sugar transport system ATP-binding protein {ECO:0000313|EMBL:BAI76652.1}; TaxID=137722 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum sp. (strain B510).;"
Displaying items 1-30 of 91 in total

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