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2019_SCN_bioreactor_t3_planktonic_scaffold_9646

Search features with annotation key words

Displaying items 1-30 of 315 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
2019_SCN_bioreactor_t3_planktonic_scaffold_9646_1
Roseobacter sp. MED193, Roseobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

407..856
-----------------
DNA (450bp)
protein (150aa)
BRO domain-containing protein n=1 Tax=Pseudomonas mendocina DLHK RepID=J7UJR5_PSEME
Antirepressor protein ant {ECO:0000313|EMBL:EAQ47716.1}; TaxID=314262 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Roseobacter.;" source="Roseobacter sp. MED193.;"
BRO family, N-terminal domain protein. Phage-related DNA binding protein
2019_SCN_bioreactor_t3_planktonic_scaffold_9646_2
Komagataeibacter europaeus, Komagataeibacter, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3201..3710)
-----------------
DNA (510bp)
protein (170aa)
Uncharacterized protein {ECO:0000313|EMBL:GAN96736.1}; TaxID=1234669 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Komagataeibacter.;" source="Komagataeibacter europaeus NBRC 3261.;"
2019_SCN_bioreactor_t3_planktonic_scaffold_9646_3
Lysobacter daejeonensis, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4084..4983
-----------------
DNA (900bp)
protein (300aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KGM55013.1}; TaxID=1385517 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter daejeonensis GH1-9.;"
2019_SCN_bioreactor_t3_planktonic_scaffold_9646_4
Azospirillum thiophilum, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5122..5679
-----------------
DNA (558bp)
protein (186aa)
Resolvase n=1 Tax=Magnetospirillum sp. SO-1 RepID=M2ZS84_9PROT
DNA invertase {ECO:0000313|EMBL:KJR66765.1}; TaxID=528244 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum thiophilum.;"
resolvase
2019_SCN_bioreactor_t3_planktonic_scaffold_9646_5
Azospirillum lipoferum, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6608..7264
-----------------
DNA (657bp)
protein (219aa)
Protein-L-isoaspartate O-methyltransferase {ECO:0000313|EMBL:CBS86860.1}; EC=2.1.1.77 {ECO:0000313|EMBL:CBS86860.1};; TaxID=862719 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum lipoferum (strain 4B).;"
Protein-L-isoaspartate O-methyltransferase n=1 Tax=Azospirillum lipoferum (strain 4B) RepID=G7Z7D6_AZOL4
protein-L-isoaspartate O-methyltransferase
2019_SCN_bioreactor_t3_planktonic_scaffold_9646_6
Azospirillum lipoferum, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7367..7693
-----------------
DNA (327bp)
protein (109aa)
Thiosulfate sulfurtransferase n=1 Tax=Azospirillum sp. (strain B510) RepID=D3NU64_AZOS1
thiosulfate sulfurtransferase
Thiosulfate sulfurtransferase {ECO:0000313|EMBL:BAI71943.1}; TaxID=137722 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum sp. (strain B510).;"
2019_SCN_bioreactor_t3_planktonic_scaffold_9646_7
Azospirillum lipoferum, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7696..9099
-----------------
DNA (1404bp)
protein (468aa)
Putative Type I secretion outer membrane protein (TolC-like) n=1 Tax=Azospirillum lipoferum (strain 4B) RepID=G7Z588_AZOL4
putative Type I secretion outer membrane protein (TolC-like)
Putative Type I secretion outer membrane protein (TolC-like) {ECO:0000313|EMBL:CBS86858.1}; TaxID=862719 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum lipoferum (strain 4B).;"
2019_SCN_bioreactor_t3_planktonic_scaffold_9646_8
Azospirillum lipoferum, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9226..9885
-----------------
DNA (660bp)
protein (220aa)
Uncharacterized protein n=1 Tax=Azospirillum lipoferum (strain 4B) RepID=G7Z587_AZOL4
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBS86857.1}; TaxID=862719 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum lipoferum (strain 4B).;"
2019_SCN_bioreactor_t3_planktonic_scaffold_9646_9
Azospirillum lipoferum, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


9939..12587
-----------------
DNA (2649bp)
protein (883aa)
Valine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_02004, ECO:0000256|SAAS:SAAS00026840}; EC=6.1.1.9 {ECO:0000256|HAMAP-Rule:MF_02004, ECO:0000256|SAAS:SAAS00105779};; Valyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_02004}; TaxID=862719 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum lipoferum (strain 4B).;"
Valine--tRNA ligase n=1 Tax=Azospirillum lipoferum (strain 4B) RepID=G7Z7D4_AZOL4
valS; valyl-tRNA synthetase
2019_SCN_bioreactor_t3_planktonic_scaffold_9646_10
Azospirillum lipoferum, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12757..12900)
-----------------
DNA (144bp)
protein (48aa)
Uncharacterized protein n=1 Tax=Azospirillum lipoferum (strain 4B) RepID=G7Z4S2_AZOL4
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBS86511.1}; TaxID=862719 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum lipoferum (strain 4B).;"
2019_SCN_bioreactor_t3_planktonic_scaffold_9646_11
Azospirillum lipoferum, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13026..13679)
-----------------
DNA (654bp)
protein (218aa)
purN; phosphoribosylglycinamide formyltransferase (EC:2.1.2.2)
Phosphoribosylglycinamide formyltransferase {ECO:0000256|HAMAP-Rule:MF_01930}; EC=2.1.2.2 {ECO:0000256|HAMAP-Rule:MF_01930};; 5'-phosphoribosylglycinamide transformylase {ECO:0000256|HAMAP-Rule:MF_01930}; GAR transformylase {ECO:0000256|HAMAP-Rule:MF_01930}; TaxID=137722 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum sp. (strain B510).;"
Phosphoribosylglycinamide formyltransferase n=1 Tax=Azospirillum sp. (strain B510) RepID=D3NU68_AZOS1
2019_SCN_bioreactor_t3_planktonic_scaffold_9646_12
Azospirillum lipoferum, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13703..14764)
-----------------
DNA (1062bp)
protein (354aa)
purM; phosphoribosylformylglycinamidine cyclo-ligase (EC:6.3.3.1)
Phosphoribosylformylglycinamidine cyclo-ligase {ECO:0000256|HAMAP-Rule:MF_00741, ECO:0000256|RuleBase:RU004370}; EC=6.3.3.1 {ECO:0000256|HAMAP-Rule:MF_00741, ECO:0000256|RuleBase:RU004370};; AIR synthase {ECO:0000256|HAMAP-Rule:MF_00741}; AIRS {ECO:0000256|HAMAP-Rule:MF_00741}; Phosphoribosyl-aminoimidazole synthetase {ECO:0000256|HAMAP-Rule:MF_00741}; TaxID=137722 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum sp. (strain B510).;"
Phosphoribosylformylglycinamidine cyclo-ligase n=1 Tax=Azospirillum sp. (strain B510) RepID=D3NU69_AZOS1
2019_SCN_bioreactor_t3_planktonic_scaffold_9646_13
Azospirillum lipoferum, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14784..16247
-----------------
DNA (1464bp)
protein (488aa)
Uncharacterized protein n=1 Tax=Azospirillum sp. (strain B510) RepID=D3NU70_AZOS1
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAI71949.1}; TaxID=137722 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum sp. (strain B510).;"
2019_SCN_bioreactor_t3_planktonic_scaffold_9646_14
Azospirillum lipoferum, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16244..16804
-----------------
DNA (561bp)
protein (187aa)
Putative phosphatidylglycerophosphate synthase {ECO:0000313|EMBL:CBS86515.1}; EC=2.7.8.5 {ECO:0000313|EMBL:CBS86515.1};; TaxID=862719 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum lipoferum (strain 4B).;"
Putative phosphatidylglycerophosphate synthase n=1 Tax=Azospirillum lipoferum (strain 4B) RepID=G7Z6F9_AZOL4
putative phosphatidylglycerophosphate synthase
2019_SCN_bioreactor_t3_planktonic_scaffold_9646_15
Azospirillum lipoferum, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16801..17868
-----------------
DNA (1068bp)
protein (356aa)
Uncharacterized protein n=1 Tax=Azospirillum lipoferum (strain 4B) RepID=G7Z6G0_AZOL4
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBS86516.1}; TaxID=862719 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum lipoferum (strain 4B).;"
2019_SCN_bioreactor_t3_planktonic_scaffold_9646_16
Azospirillum lipoferum, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17930..18604
-----------------
DNA (675bp)
protein (225aa)
Uncharacterized protein n=1 Tax=Azospirillum lipoferum (strain 4B) RepID=G7Z6G1_AZOL4
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBS86517.1}; TaxID=862719 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum lipoferum (strain 4B).;"
2019_SCN_bioreactor_t3_planktonic_scaffold_9646_17
Azospirillum lipoferum, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18627..19406
-----------------
DNA (780bp)
protein (260aa)
Putative short-chain reductase/dehydrogenase {ECO:0000313|EMBL:CBS86518.1}; EC=1.1.1.- {ECO:0000313|EMBL:CBS86518.1};; TaxID=862719 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum lipoferum (strain 4B).;"
Putative short-chain reductase/dehydrogenase n=1 Tax=Azospirillum lipoferum (strain 4B) RepID=G7Z6G2_AZOL4
putative short-chain reductase/dehydrogenase
2019_SCN_bioreactor_t3_planktonic_scaffold_9646_18
Azospirillum lipoferum, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19647..20129
-----------------
DNA (483bp)
protein (161aa)
Exopolysaccharide II synthesis transcriptional activator n=1 Tax=Azospirillum sp. (strain B510) RepID=D3NU75_AZOS1
exopolysaccharide II synthesis transcriptional activator
Exopolysaccharide II synthesis transcriptional activator {ECO:0000313|EMBL:BAI71954.1}; TaxID=137722 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum sp. (strain B510).;"
2019_SCN_bioreactor_t3_planktonic_scaffold_9646_19
unknown

Not on your lists

20324..20422
-----------------
DNA (99bp)
protein (33aa)

This feature has no annotations

2019_SCN_bioreactor_t3_planktonic_scaffold_9646_20
Azospirillum lipoferum, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20652..22325
-----------------
DNA (1674bp)
protein (558aa)
Uncharacterized protein n=1 Tax=Azospirillum sp. (strain B510) RepID=D3NU76_AZOS1
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAI71955.1}; TaxID=137722 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum sp. (strain B510).;"
2019_SCN_bioreactor_t3_planktonic_scaffold_9646_21
Azospirillum lipoferum, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22435..23259)
-----------------
DNA (825bp)
protein (275aa)
hutG; formiminoglutamase (EC:3.5.3.8)
Formiminoglutamase {ECO:0000313|EMBL:BAI71956.1}; EC=3.5.3.8 {ECO:0000313|EMBL:BAI71956.1};; TaxID=137722 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum sp. (strain B510).;"
Formiminoglutamase n=1 Tax=Azospirillum sp. (strain B510) RepID=D3NU77_AZOS1
2019_SCN_bioreactor_t3_planktonic_scaffold_9646_22
Azospirillum lipoferum, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23628..24143
-----------------
DNA (516bp)
protein (172aa)
Uncharacterized protein n=1 Tax=Azospirillum lipoferum (strain 4B) RepID=G7Z6G4_AZOL4
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBS86522.1}; TaxID=862719 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum lipoferum (strain 4B).;"
2019_SCN_bioreactor_t3_planktonic_scaffold_9646_23
Azospirillum lipoferum, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24175..25422
-----------------
DNA (1248bp)
protein (416aa)
Uncharacterized protein n=1 Tax=Azospirillum sp. (strain B510) RepID=D3NU79_AZOS1
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAI71958.1}; TaxID=137722 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum sp. (strain B510).;"
2019_SCN_bioreactor_t3_planktonic_scaffold_9646_24
Azospirillum lipoferum, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25466..26707
-----------------
DNA (1242bp)
protein (414aa)
Glycosyl transferase n=1 Tax=Azospirillum sp. (strain B510) RepID=D3NU80_AZOS1
glycosyl transferase
Glycosyl transferase {ECO:0000313|EMBL:BAI71959.1}; TaxID=137722 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum sp. (strain B510).;"
2019_SCN_bioreactor_t3_planktonic_scaffold_9646_25
Azospirillum lipoferum, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26700..28088
-----------------
DNA (1389bp)
protein (463aa)
Uncharacterized protein n=1 Tax=Azospirillum sp. (strain B510) RepID=D3NU81_AZOS1
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAI71960.1}; TaxID=137722 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum sp. (strain B510).;"
2019_SCN_bioreactor_t3_planktonic_scaffold_9646_26
Nitrospirillum amazonense, Nitrospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28091..30163
-----------------
DNA (2073bp)
protein (691aa)
Recombinase n=1 Tax=Azospirillum amazonense Y2 RepID=G1XZ07_9PROT
Recombinase {ECO:0000313|EMBL:EGY01500.1}; TaxID=1003237 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Nitrospirillum.;" source="Nitrospirillum amazonense Y2.;"
recombinase
2019_SCN_bioreactor_t3_planktonic_scaffold_9646_27
unknown

Not on your lists

30178..30291
-----------------
DNA (114bp)
protein (38aa)

This feature has no annotations

2019_SCN_bioreactor_t3_planktonic_scaffold_9646_28
Azospirillum thiophilum, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30288..31334
-----------------
DNA (1047bp)
protein (349aa)
Putative Lipopolysaccharide core biosynthesis glycosyltransferase n=1 Tax=Azospirillum lipoferum (strain 4B) RepID=G7Z6G8_AZOL4
Glycosyl transferase {ECO:0000313|EMBL:KJR66891.1}; TaxID=528244 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum thiophilum.;"
putative Lipopolysaccharide core biosynthesis glycosyltransferase
2019_SCN_bioreactor_t3_planktonic_scaffold_9646_29
Azospirillum lipoferum, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31244..31711)
-----------------
DNA (468bp)
protein (156aa)
Transcriptional regulator n=1 Tax=Azospirillum sp. (strain B510) RepID=D3NU83_AZOS1
transcriptional regulator
Transcriptional regulator {ECO:0000313|EMBL:BAI71962.1}; TaxID=137722 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum sp. (strain B510).;"
2019_SCN_bioreactor_t3_planktonic_scaffold_9646_30
Azospirillum lipoferum, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31846..32640)
-----------------
DNA (795bp)
protein (265aa)
Colanic acid biosynthesis glycosyl transferase n=1 Tax=Azospirillum sp. (strain B510) RepID=D3NU84_AZOS1
colanic acid biosynthesis glycosyl transferase
Colanic acid biosynthesis glycosyl transferase {ECO:0000313|EMBL:BAI71963.1}; TaxID=137722 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum sp. (strain B510).;"
Displaying items 1-30 of 315 in total

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