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2019_SCN_bioreactor_t3_planktonic_scaffold_5545_4

Organism: 2019_SCN_bioreactor_t3_planktonic_Azospirillum_lipoferum_68_106

near complete RP 49 / 55 BSCG 51 / 51 ASCG 12 / 38
Location: comp(2781..3152)

Top 3 Functional Annotations

Value Algorithm Source
30S ribosomal protein S12 n=3 Tax=Azospirillum RepID=D3NS35_AZOS1 similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 123.0
  • Bit_score: 252
  • Evalue 1.30e-64
rpsL; 30S ribosomal subunit protein S12 similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 123.0
  • Bit_score: 252
  • Evalue 3.80e-65
30S ribosomal protein S12 {ECO:0000256|HAMAP-Rule:MF_00403, ECO:0000256|RuleBase:RU003623}; TaxID=137722 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum sp. (strain B510).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 123.0
  • Bit_score: 252
  • Evalue 1.90e-64

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Taxonomy

Azospirillum lipoferum → Azospirillum → Rhodospirillales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 372
ATGCCGACGATCAACCAGTTGATCCGTAAGCCGCGCGAGCCGTTGGCCGCGCGCAACAAGGTTCCCGCGATGGAGGCTTGCCCGCAGAAGCGTGGCGTCTGCACTCGCGTTTACACCACCACCCCGAAGAAGCCGAACTCGGCGCTCCGTAAGGTTGCCCGCGTTCGTCTGACGAACGGCTTCGAGGTGACGAGCTACATCCCTGGTGAGGGCCACAACCTCCAGGAACACTCGGTGGTCATGATCCGCGGCGGTCGTGTGAAGGATCTTCCCGGCGTTCGCTATCACATCATTCGCGGCACGCTGGATACCCAGGGCGTCAAGGATCGTAAGCAGCGCCGTTCGAAGTACGGCGCGAAGCGTCCGAAGTAA
PROTEIN sequence
Length: 124
MPTINQLIRKPREPLAARNKVPAMEACPQKRGVCTRVYTTTPKKPNSALRKVARVRLTNGFEVTSYIPGEGHNLQEHSVVMIRGGRVKDLPGVRYHIIRGTLDTQGVKDRKQRRSKYGAKRPK*