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2019_SCN_bioreactor_t3_planktonic_scaffold_21758

Search features with annotation key words

Displaying items 1-30 of 70 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
2019_SCN_bioreactor_t3_planktonic_scaffold_21758_1
Pantoea ananatis, Pantoea, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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3..122
DNA (120bp) protein (40aa)
Uncharacterized protein n=2 Tax=Escherichia coli RepID=L3I600_ECOLX
transposase
Transposase (ECO:0000313|EMBL:KEG33057.1) {ECO:0000313|EMBL:CRH31778.1}; Flags: Fragment;; TaxID=553 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Pantoea.;" source="Pantoea ananas (Erwinia uredovora).;"
2019_SCN_bioreactor_t3_planktonic_scaffold_21758_2
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(138..1856)
DNA (1719bp) protein (573aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;"
Signal transduction histidine kinase n=1 Tax=Variovorax sp. CF313 RepID=J2T2M4_9BURK
histidine kinase
2019_SCN_bioreactor_t3_planktonic_scaffold_21758_3
Enterobacter asburiae, Enterobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2368..3627)
DNA (1260bp) protein (420aa)
Uncharacterized protein n=1 Tax=Enterobacter sp. MGH 34 RepID=V3NEG4_9ENTR
integrase
Integrase {ECO:0000313|EMBL:AHW95850.1}; TaxID=1421338 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Enterobacter; Enterobacter cloacae complex.;" source="Enterobacter asburiae L1.;"
2019_SCN_bioreactor_t3_planktonic_scaffold_21758_4
Klebsiella oxytoca, Klebsiella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4145..5164
DNA (1020bp) protein (340aa)
Alcohol dehydrogenase, catalytic domain protein, GroES-like family n=5 Tax=Klebsiella RepID=J6IF20_9ENTR
Zinc-type alcohol dehydrogenase {ECO:0000313|EMBL:EWF77651.1}; TaxID=1328430 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Klebsiella.;" source="Klebsiella oxytoca MGH 41.;"
alcohol dehydrogenase
2019_SCN_bioreactor_t3_planktonic_scaffold_21758_5
Klebsiella oxytoca, Klebsiella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5224..6228
DNA (1005bp) protein (335aa)
N-Acetyl-D-glucosamine ABC transport system n=2 Tax=Klebsiella oxytoca RepID=I6WR72_KLEOX
sn-glycerol-3-phosphate transport system permease {ECO:0000313|EMBL:EWF77650.1}; TaxID=1328430 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Klebsiella.;" source="Klebsiella oxytoca MGH 41.;"
N-Acetyl-D-glucosamine ABC transport system
2019_SCN_bioreactor_t3_planktonic_scaffold_21758_6
Klebsiella oxytoca, Klebsiella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6218..7105
DNA (888bp) protein (296aa)
Putative SN-glycerol-3-phosphate transport system permease n=2 Tax=Klebsiella oxytoca RepID=G8WIB1_KLEOK
SN-glycerol-3-phosphate transport system permease
Putative SN-glycerol-3-phosphate transport system permease {ECO:0000313|EMBL:AFN30430.1}; TaxID=1191061 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Klebsiella.;" source="Klebsiella oxytoca E718.;"
2019_SCN_bioreactor_t3_planktonic_scaffold_21758_7
Klebsiella oxytoca, Klebsiella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7116..7940
DNA (825bp) protein (275aa)
3',5'-cyclic adenosine monophosphate phosphodiesterase CpdA {ECO:0000256|HAMAP-Rule:MF_00905}; Short=3',5'-cyclic AMP phosphodiesterase {ECO:0000256|HAMAP-Rule:MF_00905};; Short=cAMP phosphodiesterase {ECO:0000256|HAMAP-Rule:MF_00905};; EC=3.1.4.17 {ECO:0000256|HAMAP-Rule:MF_00905};; TaxID=1333852 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Klebsiella.;" source="Klebsiella oxytoca KONIH1.;"
3',5'-cyclic adenosine monophosphate phosphodiesterase CpdA n=5 Tax=Klebsiella oxytoca RepID=G8WIB0_KLEOK
3',5'-cyclic-nucleotide phosphodiesterase
2019_SCN_bioreactor_t3_planktonic_scaffold_21758_8
Klebsiella oxytoca, Klebsiella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7946..9019
DNA (1074bp) protein (358aa)
Sugar ABC transporter, ATP-binding protein n=2 Tax=Klebsiella oxytoca RepID=G8WIA9_KLEOK
ABC transporter
Putative sugar ABC transporter {ECO:0000313|EMBL:AFN29272.1}; TaxID=1191061 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Klebsiella.;" source="Klebsiella oxytoca E718.;"
2019_SCN_bioreactor_t3_planktonic_scaffold_21758_9
Klebsiella oxytoca, Klebsiella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9012..10322
DNA (1311bp) protein (437aa)
Glycerol-3-phosphate-binding protein n=1 Tax=Klebsiella oxytoca E718 RepID=I6WUA6_KLEOX
sn-glycerol-3-phosphate transport system substrate-binding protein {ECO:0000313|EMBL:EWF77646.1}; TaxID=1328430 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Klebsiella.;" source="Klebsiella oxytoca MGH 41.;"
glycerol-3-phosphate-binding protein
2019_SCN_bioreactor_t3_planktonic_scaffold_21758_10
Klebsiella oxytoca, Klebsiella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10499..11998)
DNA (1500bp) protein (500aa)
Major myo-inositol transporter IolT n=1 Tax=Klebsiella oxytoca E718 RepID=I6VQD3_KLEOX
major myo-inositol transporter IolT
Major myo-inositol transporter IolT {ECO:0000313|EMBL:AFN30427.1}; TaxID=1191061 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Klebsiella.;" source="Klebsiella oxytoca E718.;"
2019_SCN_bioreactor_t3_planktonic_scaffold_21758_11
Klebsiella oxytoca, Klebsiella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12167..13066)
DNA (900bp) protein (300aa)
Inosose dehydratase {ECO:0000256|HAMAP-Rule:MF_01672}; EC=4.2.1.44 {ECO:0000256|HAMAP-Rule:MF_01672};; 2-keto-myo-inositol dehydratase {ECO:0000256|HAMAP-Rule:MF_01672}; TaxID=1328430 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Klebsiella.;" source="Klebsiella oxytoca MGH 41.;"
Inosose dehydratase n=4 Tax=Klebsiella oxytoca RepID=G8WIA6_KLEOK
inosose dehydratase
2019_SCN_bioreactor_t3_planktonic_scaffold_21758_12
Klebsiella sp. OBRC7, Klebsiella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13092..13976)
DNA (885bp) protein (295aa)
Xylose isomerase n=9 Tax=Klebsiella RepID=G8WIA5_KLEOK
glyceraldehyde-3-phosphate ketol-isomerase
Protein IolH {ECO:0000313|EMBL:EJU33179.1}; TaxID=936565 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Klebsiella.;" source="Klebsiella sp. OBRC7.;"
2019_SCN_bioreactor_t3_planktonic_scaffold_21758_13
Klebsiella oxytoca, Klebsiella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14018..15031)
DNA (1014bp) protein (338aa)
Inositol 2-dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01671, ECO:0000256|SAAS:SAAS00010088}; EC=1.1.1.18 {ECO:0000256|HAMAP-Rule:MF_01671, ECO:0000256|SAAS:SAAS00010088};; Myo-inositol 2-dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01671}; TaxID=1333852 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Klebsiella.;" source="Klebsiella oxytoca KONIH1.;"
Inositol 2-dehydrogenase n=4 Tax=Klebsiella oxytoca RepID=G8WIA4_KLEOK
Myo-inositol 2-dehydrogenase 1
2019_SCN_bioreactor_t3_planktonic_scaffold_21758_14
Klebsiella oxytoca, Klebsiella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15080..17020)
DNA (1941bp) protein (647aa)
Acetolactate synthase n=2 Tax=Klebsiella oxytoca RepID=G8WIA3_KLEOK
3D-(3,5/4)-trihydroxycyclohexane-1,2-dione hydrolase {ECO:0000313|EMBL:EWF77641.1}; TaxID=1328430 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Klebsiella.;" source="Klebsiella oxytoca MGH 41.;"
Epi-inositol hydrolase
2019_SCN_bioreactor_t3_planktonic_scaffold_21758_15
Klebsiella oxytoca, Klebsiella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17546..19459
DNA (1914bp) protein (638aa)
Uncharacterized protein n=1 Tax=Klebsiella oxytoca (strain ATCC 8724 / DSM 4798 / JCM 20051 / NBRC 3318 / NRRL B-199 / KCTC 1686) RepID=G8WIA2_KLEOK
5-dehydro-2-deoxygluconokinase {ECO:0000313|EMBL:AID88066.1}; TaxID=1333852 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Klebsiella.;" source="Klebsiella oxytoca KONIH1.;"
hypothetical protein
2019_SCN_bioreactor_t3_planktonic_scaffold_21758_16
Klebsiella oxytoca, Klebsiella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19611..20468
DNA (858bp) protein (286aa)
SIS domain protein n=7 Tax=Klebsiella RepID=J5Y0C7_9ENTR
Fe-S cluster assembly protein HesB
Putative transcriptional regulator of the myo-inositol catabolic operon {ECO:0000313|EMBL:AFN30421.1}; TaxID=1191061 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Klebsiella.;" source="Klebsiella oxytoca E718.;"
2019_SCN_bioreactor_t3_planktonic_scaffold_21758_17
Klebsiella oxytoca, Klebsiella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20900..21709)
DNA (810bp) protein (270aa)
Myo-inositol catabolism protein n=1 Tax=Klebsiella oxytoca M5al RepID=K6KB30_KLEOX
5-deoxy-glucuronate isomerase {ECO:0000313|EMBL:EWF77638.1}; TaxID=1328430 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Klebsiella.;" source="Klebsiella oxytoca MGH 41.;"
5-deoxy-glucuronate isomerase
2019_SCN_bioreactor_t3_planktonic_scaffold_21758_18
Klebsiella oxytoca, Klebsiella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21728..23233)
DNA (1506bp) protein (502aa)
Methylmalonate-semialdehyde dehydrogenase n=1 Tax=Klebsiella oxytoca E718 RepID=I6WJG6_KLEOX
methylmalonate-semialdehyde dehydrogenase
Methylmalonate-semialdehyde dehydrogenase {ECO:0000313|EMBL:AID88063.1}; TaxID=1333852 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Klebsiella.;" source="Klebsiella oxytoca KONIH1.;"
2019_SCN_bioreactor_t3_planktonic_scaffold_21758_19
Klebsiella oxytoca, Klebsiella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23595..24416
DNA (822bp) protein (274aa)
Inosose isomerase n=1 Tax=Klebsiella oxytoca E718 RepID=I6WU98_KLEOX
inosose isomerase
Inosose isomerase {ECO:0000313|EMBL:AFN30418.1}; TaxID=1191061 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Klebsiella.;" source="Klebsiella oxytoca E718.;"
2019_SCN_bioreactor_t3_planktonic_scaffold_21758_20
Klebsiella oxytoca, Klebsiella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24503..26005
DNA (1503bp) protein (501aa)
Uncharacterized protein n=2 Tax=Klebsiella oxytoca RepID=G8WHK7_KLEOK
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFN30417.1}; TaxID=1191061 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Klebsiella.;" source="Klebsiella oxytoca E718.;"
2019_SCN_bioreactor_t3_planktonic_scaffold_21758_21
Klebsiella oxytoca, Klebsiella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26047..27129)
DNA (1083bp) protein (361aa)
Lipopolysaccharide ABC transporter permease n=2 Tax=Klebsiella oxytoca RepID=G8WHK6_KLEOK
Permease
Lipopolysaccharide export system permease lptG {ECO:0000313|EMBL:EWF77634.1}; TaxID=1328430 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Klebsiella.;" source="Klebsiella oxytoca MGH 41.;"
2019_SCN_bioreactor_t3_planktonic_scaffold_21758_22
Klebsiella oxytoca, Klebsiella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27129..28226)
DNA (1098bp) protein (366aa)
Lipopolysaccharide ABC transporter permease LptF n=4 Tax=Klebsiella RepID=G8WHK5_KLEOK
lipopolysaccharide ABC transporter permease LptF
Lipopolysaccharide export system permease lptF {ECO:0000313|EMBL:EWF77633.1}; TaxID=1328430 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Klebsiella.;" source="Klebsiella oxytoca MGH 41.;"
2019_SCN_bioreactor_t3_planktonic_scaffold_21758_23
Klebsiella oxytoca, Klebsiella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28620..30131
DNA (1512bp) protein (504aa)
multifunctional aminopeptidase A (EC:3.4.11.1)
Probable cytosol aminopeptidase n=3 Tax=Klebsiella RepID=G8WHK4_KLEOK
Probable cytosol aminopeptidase {ECO:0000256|HAMAP-Rule:MF_00181}; Leucine aminopeptidase {ECO:0000256|HAMAP-Rule:MF_00181}; Leucyl aminopeptidase {ECO:0000256|HAMAP-Rule:MF_00181}; TaxID=1328430 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Klebsiella.;" source="Klebsiella oxytoca MGH 41.;"
2019_SCN_bioreactor_t3_planktonic_scaffold_21758_24
Klebsiella oxytoca, Klebsiella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30254..30697
DNA (444bp) protein (148aa)
DNA polymerase III chi subunit n=9 Tax=Klebsiella RepID=I6VQB9_KLEOX
DNA polymerase III subunit chi
DNA polymerase III subunit chi {ECO:0000313|EMBL:EHS88563.1}; TaxID=883120 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Klebsiella.;" source="Klebsiella oxytoca 10-5245.;"
2019_SCN_bioreactor_t3_planktonic_scaffold_21758_25
Klebsiella sp. OBRC7, Klebsiella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


30697..33552
DNA (2856bp) protein (952aa)
Valine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_02004, ECO:0000256|SAAS:SAAS00026840}; EC=6.1.1.9 {ECO:0000256|HAMAP-Rule:MF_02004, ECO:0000256|SAAS:SAAS00105779};; Valyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_02004}; TaxID=936565 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Klebsiella.;" source="Klebsiella sp. OBRC7.;"
Valine--tRNA ligase n=4 Tax=Klebsiella RepID=G8WHK2_KLEOK
valyl-tRNA synthase
2019_SCN_bioreactor_t3_planktonic_scaffold_21758_26
Klebsiella oxytoca, Klebsiella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

33675..34178
DNA (504bp) protein (168aa)
Uncharacterized protein n=4 Tax=Klebsiella RepID=G8WHK1_KLEOK
acetyltransferase
Acetyltransferase {ECO:0000313|EMBL:AID88055.1}; TaxID=1333852 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Klebsiella.;" source="Klebsiella oxytoca KONIH1.;"
2019_SCN_bioreactor_t3_planktonic_scaffold_21758_27
Klebsiella oxytoca, Klebsiella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

34331..35353
DNA (1023bp) protein (341aa)
Peptidase, S15 family protein n=1 Tax=Klebsiella oxytoca (strain ATCC 8724 / DSM 4798 / JCM 20051 / NBRC 3318 / NRRL B-199 / KCTC 1686) RepID=G8WHK0_KLEOK
alpha/beta hydrolase
Alpha/beta hydrolase {ECO:0000313|EMBL:AID88054.1}; TaxID=1333852 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Klebsiella.;" source="Klebsiella oxytoca KONIH1.;"
2019_SCN_bioreactor_t3_planktonic_scaffold_21758_28
Klebsiella oxytoca, Klebsiella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(36204..36629)
DNA (426bp) protein (142aa)
Regulator of ribonuclease activity B n=5 Tax=Klebsiella oxytoca RepID=G8WHJ8_KLEOK
RNase E inhibitor protein
Regulator of ribonuclease activity B {ECO:0000256|HAMAP-Rule:MF_01888}; TaxID=883125 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Klebsiella.;" source="Klebsiella oxytoca 10-5250.;"
2019_SCN_bioreactor_t3_planktonic_scaffold_21758_29
Klebsiella oxytoca, Klebsiella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

36794..37798
DNA (1005bp) protein (335aa)
Ornithine carbamoyltransferase {ECO:0000256|HAMAP-Rule:MF_01109, ECO:0000256|SAAS:SAAS00106174}; Short=OTCase {ECO:0000256|HAMAP-Rule:MF_01109};; EC=2.1.3.3 {ECO:0000256|HAMAP-Rule:MF_01109, ECO:0000256|SAAS:SAAS00106174};; TaxID=1333852 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Klebsiella.;" source="Klebsiella oxytoca KONIH1.;"
Ornithine carbamoyltransferase, catabolic n=2 Tax=Klebsiella oxytoca RepID=G8WHJ7_KLEOK
ornithine carbamoyltransferase
2019_SCN_bioreactor_t3_planktonic_scaffold_21758_30
Klebsiella oxytoca, Klebsiella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(37910..38362)
DNA (453bp) protein (151aa)
Uncharacterized protein n=2 Tax=Klebsiella oxytoca RepID=G8WHJ6_KLEOK
toxin-antitoxin biofilm protein TabA
Protein YjgK {ECO:0000313|EMBL:AFN29271.1}; TaxID=1191061 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Klebsiella.;" source="Klebsiella oxytoca E718.;"
Displaying items 1-30 of 70 in total

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