ggKbase home page

2019_SCN_bioreactor_t3_planktonic_scaffold_31261

Search features with annotation key words

Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
2019_SCN_bioreactor_t3_planktonic_scaffold_31261_1
Flavobacterium suncheonense, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(1..2868)
DNA (2868bp) protein (956aa)
multidrug transporter n=1 Tax=Schlesneria paludicola RepID=UPI00029B0D47
Multidrug transporter AcrB {ECO:0000313|EMBL:KGO90578.1}; TaxID=1121899 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium suncheonense GH29-5 = DSM 17707.;"
hydrophobe/amphiphile efflux-1 (HAE1) family transporter
2019_SCN_bioreactor_t3_planktonic_scaffold_31261_2
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(2925..4019)
DNA (1095bp) protein (365aa)
hemolysin D n=1 Tax=Schlesneria paludicola RepID=UPI00029B2805
RND family efflux transporter MFP subunit
RND family efflux transporter, MFP subunit {ECO:0000313|EMBL:AGA30955.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
2019_SCN_bioreactor_t3_planktonic_scaffold_31261_3
unknown

Not on your lists

comp(4545..4802)
DNA (258bp) protein (86aa)

This feature has no annotations

2019_SCN_bioreactor_t3_planktonic_scaffold_31261_4
Planctopirus limnophila, Planctopirus, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(4956..5300)
DNA (345bp) protein (115aa)
ArsR family transcriptional regulator n=1 Tax=Schlesneria paludicola RepID=UPI00029AC22A
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADG69505.1}; TaxID=521674 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Planctopirus.;" source="Planctopirus limnophila (strain ATCC 43296 / DSM 3776 / IFAM 1008 /; 290) (Planctomyces limnophilus).;"
2019_SCN_bioreactor_t3_planktonic_scaffold_31261_5
unknown

Not on your lists

comp(5599..6387)
DNA (789bp) protein (263aa)
cysteine peptidase, YopT-like protein n=1 Tax=Schlesneria paludicola RepID=UPI00029A5F67
2019_SCN_bioreactor_t3_planktonic_scaffold_31261_6
Gimesia maris, Gimesia, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(7179..8123)
DNA (945bp) protein (315aa)
hypothetical protein n=1 Tax=Schlesneria paludicola RepID=UPI00029B0128
Uncharacterized protein {ECO:0000313|EMBL:EDL59276.1}; TaxID=344747 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Gimesia.;" source="Gimesia maris DSM 8797.;"
hypothetical protein
2019_SCN_bioreactor_t3_planktonic_scaffold_31261_7
Gimesia maris, Gimesia, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(8257..8781)
DNA (525bp) protein (175aa)
hypothetical protein n=1 Tax=Schlesneria paludicola RepID=UPI00029B518B
Uncharacterized protein {ECO:0000313|EMBL:EDL57527.1}; TaxID=344747 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Gimesia.;" source="Gimesia maris DSM 8797.;"
2019_SCN_bioreactor_t3_planktonic_scaffold_31261_8
unknown

Not on your lists

9190..9366
DNA (177bp) protein (59aa)

This feature has no annotations

2019_SCN_bioreactor_t3_planktonic_scaffold_31261_9
Gimesia maris, Gimesia, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(9686..10513)
DNA (828bp) protein (276aa)
IclR family transcriptional regulator n=1 Tax=Schlesneria paludicola RepID=UPI00029A97BE
Transcriptional regulator, IclR family protein {ECO:0000313|EMBL:EDL61929.1}; TaxID=344747 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Gimesia.;" source="Gimesia maris DSM 8797.;"
transcription regulator protein
2019_SCN_bioreactor_t3_planktonic_scaffold_31261_10
Planctopirus limnophila, Planctopirus, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

11597..13354
DNA (1758bp) protein (586aa)
hypothetical protein n=1 Tax=Schlesneria paludicola RepID=UPI00029B4012
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADG69063.1}; TaxID=521674 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Planctopirus.;" source="Planctopirus limnophila (strain ATCC 43296 / DSM 3776 / IFAM 1008 /; 290) (Planctomyces limnophilus).;"
2019_SCN_bioreactor_t3_planktonic_scaffold_31261_11
Pirellula staleyi, Pirellula, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

13413..14150
DNA (738bp) protein (246aa)
PA14 domain-containing protein n=1 Tax=Schlesneria paludicola RepID=UPI00029A19C0
PA14 domain-containing protein
PA14 domain protein {ECO:0000313|EMBL:ADB18538.1}; Flags: Precursor;; TaxID=530564 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Pirellula.;" source="Pirellula staleyi (strain ATCC 27377 / DSM 6068 / ICPB 4128) (Pirella; staleyi).;"
2019_SCN_bioreactor_t3_planktonic_scaffold_31261_12
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

14095..15891
DNA (1797bp) protein (599aa)
PA14 domain-containing protein n=1 Tax=Schlesneria paludicola RepID=UPI00029A19C0
cytochrome c1
Cytochrome c1 {ECO:0000313|EMBL:AGA29915.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
Displaying 12 items

View Taxonomy