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2019_SCN_bioreactor_t3_planktonic_scaffold_59665

Search features with annotation key words

Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
2019_SCN_bioreactor_t3_planktonic_scaffold_59665_1
Thermoanaerobaculum aquaticum, Thermoanaerobaculum, Acidobacteria, Bacteria

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3..455
DNA (453bp) protein (151aa)
Cytochrome c oxidase subunit 2; EC=1.9.3.1;; TaxID=1312852 species="Bacteria; Acidobacteria; Acidobacteria subdivision 23; Thermoanaerobaculum.;" source="Thermoanaerobaculum aquaticum.;"
cytochrome oxidase subunit II n=1 Tax=Schlesneria paludicola RepID=UPI00029B0B4E
cytochrome C oxidase subunit II
2019_SCN_bioreactor_t3_planktonic_scaffold_59665_2
Amphimedon queenslandica, Amphimedon, Haplosclerida, Demospongiae, Porifera, Metazoa

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comp(896..1423)
DNA (528bp) protein (176aa)
Uncharacterized protein n=1 Tax=Amphimedon queenslandica RepID=I1EPY4_AMPQE
Uncharacterized protein {ECO:0000313|EnsemblMetazoa:PAC:15705789}; TaxID=400682 species="Eukaryota; Metazoa; Porifera; Demospongiae; Haplosclerida; Niphatidae; Amphimedon.;" source="Amphimedon queenslandica (Sponge).;"
2019_SCN_bioreactor_t3_planktonic_scaffold_59665_3
Tolypothrix campylonemoides, Tolypothrix, Nostocales, Cyanobacteria, Bacteria

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comp(1598..1885)
DNA (288bp) protein (96aa)
Uncharacterized protein {ECO:0000313|EMBL:KIJ71712.1}; Flags: Fragment;; TaxID=1245935 species="Bacteria; Cyanobacteria; Nostocales; Microchaetaceae; Tolypothrix.;" source="Tolypothrix campylonemoides VB511288.;"
2019_SCN_bioreactor_t3_planktonic_scaffold_59665_4
Rhodopirellula baltica, Rhodopirellula, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

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1990..2217
DNA (228bp) protein (76aa)
ctaD; cytochrome oxidase subunit I (EC:1.9.3.1)
Cytochrome c oxidase, subunit I {ECO:0000313|EMBL:EGF25558.1}; EC=1.7.2.5 {ECO:0000313|EMBL:EGF25558.1};; TaxID=991778 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Rhodopirellula.;" source="Rhodopirellula baltica WH47.;"
cytochrome C oxidase subunit I n=1 Tax=Schlesneria paludicola RepID=UPI00029AE60F
2019_SCN_bioreactor_t3_planktonic_scaffold_59665_5
Planctopirus limnophila, Planctopirus, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

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2261..3073
DNA (813bp) protein (271aa)
cytochrome oxidase subunit III n=1 Tax=Schlesneria paludicola RepID=UPI00029A60AD
cytochrome C oxidase subunit III
Cytochrome c oxidase subunit III {ECO:0000313|EMBL:ADG69802.1}; TaxID=521674 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Planctopirus.;" source="Planctopirus limnophila (strain ATCC 43296 / DSM 3776 / IFAM 1008 /; 290) (Planctomyces limnophilus).;"
2019_SCN_bioreactor_t3_planktonic_scaffold_59665_6
Planctopirus limnophila, Planctopirus, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

3132..3575
DNA (444bp) protein (148aa)
caa(3)-type oxidase subunit IV n=1 Tax=Schlesneria paludicola RepID=UPI00029AB7B3
caa(3)-type oxidase subunit IV
Caa(3)-type oxidase, subunit IV {ECO:0000313|EMBL:ADG69803.1}; TaxID=521674 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Planctopirus.;" source="Planctopirus limnophila (strain ATCC 43296 / DSM 3776 / IFAM 1008 /; 290) (Planctomyces limnophilus).;"
2019_SCN_bioreactor_t3_planktonic_scaffold_59665_7
unknown

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comp(3624..3911)
DNA (288bp) protein (96aa)

This feature has no annotations

2019_SCN_bioreactor_t3_planktonic_scaffold_59665_8
Planctopirus limnophila, Planctopirus, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

3922..4836
DNA (915bp) protein (305aa)
Ribosomal RNA small subunit methyltransferase H {ECO:0000256|HAMAP-Rule:MF_01007}; EC=2.1.1.199 {ECO:0000256|HAMAP-Rule:MF_01007};; 16S rRNA m(4)C1402 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01007}; rRNA (cytosine-N(4)-)-methyltransferase RsmH {ECO:0000256|HAMAP-Rule:MF_01007}; TaxID=521674 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Planctopirus.;" source="Planctopirus limnophila (strain ATCC 43296 / DSM 3776 / IFAM 1008 /; 290) (Planctomyces limnophilus).;"
S-adenosyl-methyltransferase n=1 Tax=Schlesneria paludicola RepID=UPI00029B1329
S-adenosyl-methyltransferase MraW
2019_SCN_bioreactor_t3_planktonic_scaffold_59665_9
Planctopirus limnophila, Planctopirus, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

5176..6513
DNA (1338bp) protein (446aa)
peptidoglycan-binding LysM n=1 Tax=Schlesneria paludicola RepID=UPI00029A5E14
peptidoglycan-binding LysM
Peptidoglycan-binding LysM {ECO:0000313|EMBL:ADG67617.1}; TaxID=521674 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Planctopirus.;" source="Planctopirus limnophila (strain ATCC 43296 / DSM 3776 / IFAM 1008 /; 290) (Planctomyces limnophilus).;"
2019_SCN_bioreactor_t3_planktonic_scaffold_59665_10
Planctopirus limnophila, Planctopirus, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

6721..7032
DNA (312bp) protein (104aa)
hypothetical protein n=1 Tax=Schlesneria paludicola RepID=UPI00029A88D9
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADG67618.1}; TaxID=521674 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Planctopirus.;" source="Planctopirus limnophila (strain ATCC 43296 / DSM 3776 / IFAM 1008 /; 290) (Planctomyces limnophilus).;"
2019_SCN_bioreactor_t3_planktonic_scaffold_59665_11
Gimesia maris, Gimesia, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

7077..7694
DNA (618bp) protein (206aa)
peptidoglycan glycosyltransferase (EC:2.4.1.129)
penicillin-binding protein n=1 Tax=Schlesneria paludicola RepID=UPI00029AE8B0
Penicillin-binding protein, transpeptidase {ECO:0000313|EMBL:EDL56814.1}; TaxID=344747 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Gimesia.;" source="Gimesia maris DSM 8797.;"
Displaying 11 items

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