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2019_SCN_bioreactor_t3_planktonic_scaffold_62562

Search features with annotation key words

Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
2019_SCN_bioreactor_t3_planktonic_scaffold_62562_1
Rhodopirellula sallentina, Rhodopirellula, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

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2..3406
DNA (3405bp) protein (1135aa)
hypothetical protein n=1 Tax=Schlesneria paludicola RepID=UPI00029A2B08
Myosin heavy chain {ECO:0000313|EMBL:EMI56126.1}; TaxID=1263870 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Rhodopirellula.;" source="Rhodopirellula sallentina SM41.;"
hypothetical protein
2019_SCN_bioreactor_t3_planktonic_scaffold_62562_2
Rhodopirellula sallentina, Rhodopirellula, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

3721..4653
DNA (933bp) protein (311aa)
signal peptide protein n=1 Tax=Schlesneria paludicola RepID=UPI00029A2B44
Uncharacterized protein {ECO:0000313|EMBL:EMI56124.1}; TaxID=1263870 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Rhodopirellula.;" source="Rhodopirellula sallentina SM41.;"
signal peptide
2019_SCN_bioreactor_t3_planktonic_scaffold_62562_3

Not on your lists

4670..5839
DNA (1170bp) protein (390aa)
signal peptide protein n=1 Tax=Schlesneria paludicola RepID=UPI00029A86A0
Uncharacterized protein {ECO:0000313|EMBL:KKL52312.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
signal peptide
2019_SCN_bioreactor_t3_planktonic_scaffold_62562_4
Pirellula staleyi, Pirellula, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

6102..6602
DNA (501bp) protein (167aa)
phosphoribosylaminoimidazole carboxylase catalytic subunit (EC:4.1.1.21)
N5-carboxyaminoimidazole ribonucleotide mutase {ECO:0000256|HAMAP-Rule:MF_01929, ECO:0000256|PIRNR:PIRNR001338}; Short=N5-CAIR mutase {ECO:0000256|HAMAP-Rule:MF_01929, ECO:0000256|PIRNR:PIRNR001338};; EC=5.4.99.18 {ECO:0000256|HAMAP-Rule:MF_01929, ECO:0000256|PIRNR:PIRNR001338};; 5-(carboxyamino)imidazole ribonucleotide mutase {ECO:0000256|HAMAP-Rule:MF_01929}; TaxID=530564 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Pirellula.;" source="Pirellula staleyi (strain ATCC 27377 / DSM 6068 / ICPB 4128) (Pirella; staleyi).;"
N5-carboxyaminoimidazole ribonucleotide mutase n=1 Tax=Schlesneria paludicola RepID=UPI00029B1C94
2019_SCN_bioreactor_t3_planktonic_scaffold_62562_5
Pirellula staleyi, Pirellula, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

6599..7738
DNA (1140bp) protein (380aa)
phosphoribosylaminoimidazole carboxylase ATPase subunit (EC:4.1.1.21)
N5-carboxyaminoimidazole ribonucleotide synthase {ECO:0000256|HAMAP-Rule:MF_01928, ECO:0000256|RuleBase:RU361200}; Short=N5-CAIR synthase {ECO:0000256|HAMAP-Rule:MF_01928, ECO:0000256|RuleBase:RU361200};; EC=6.3.4.18 {ECO:0000256|HAMAP-Rule:MF_01928, ECO:0000256|RuleBase:RU361200};; 5-(carboxyamino)imidazole ribonucleotide synthetase {ECO:0000256|HAMAP-Rule:MF_01928, ECO:0000256|RuleBase:RU361200}; TaxID=530564 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Pirellula.;" source="Pirellula staleyi (strain ATCC 27377 / DSM 6068 / ICPB 4128) (Pirella; staleyi).;"
phosphoribosylaminoimidazole carboxylase n=1 Tax=Schlesneria paludicola RepID=UPI00029A3960
2019_SCN_bioreactor_t3_planktonic_scaffold_62562_6
GWF2_Verrucomicrobia_62_7_curated, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

7946..9466
DNA (1521bp) protein (507aa)
hypothetical protein n=1 Tax=Schlesneria paludicola RepID=UPI00029A58FD
hypothetical protein
Tax=GWF2_Verrucomicrobia_62_7_curated
2019_SCN_bioreactor_t3_planktonic_scaffold_62562_7
Gimesia maris, Gimesia, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

9494..10966
DNA (1473bp) protein (491aa)
aldehyde dehydrogenase n=1 Tax=Schlesneria paludicola RepID=UPI00029B5148
Aldehyde dehydrogenase {ECO:0000313|EMBL:EDL60848.1}; TaxID=344747 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Gimesia.;" source="Gimesia maris DSM 8797.;"
aldehyde dehydrogenase
2019_SCN_bioreactor_t3_planktonic_scaffold_62562_8
RBG_16_Planctomycetes_64_12_curated, Planctomycetia, Planctomycetes, Bacteria

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10954..12066
DNA (1113bp) protein (371aa)
alanine racemase n=1 Tax=Schlesneria paludicola RepID=UPI000299F676
alanine racemase domain-containing protein
Tax=RBG_16_Planctomycetes_64_12_curated
2019_SCN_bioreactor_t3_planktonic_scaffold_62562_9
unknown

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12063..12272
DNA (210bp) protein (70aa)

This feature has no annotations

2019_SCN_bioreactor_t3_planktonic_scaffold_62562_10
GWF2_Lentisphaerae_52_8_curated, Lentisphaerae, Bacteria

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12262..13200
DNA (939bp) protein (313aa)
aldo/keto reductase n=1 Tax=Schlesneria paludicola RepID=UPI00029A84DA
hypothetical protein
Tax=GWF2_Lentisphaerae_52_8_curated
2019_SCN_bioreactor_t3_planktonic_scaffold_62562_11
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

13233..13985
DNA (753bp) protein (251aa)
Phytanoyl-CoA dioxygenase n=1 Tax=Schlesneria paludicola RepID=UPI00029A3162
Phytanoyl-CoA dioxygenase
Phytanoyl-CoA dioxygenase {ECO:0000313|EMBL:ACT93137.1}; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
2019_SCN_bioreactor_t3_planktonic_scaffold_62562_12
Gimesia maris, Gimesia, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(14102..15352)
DNA (1251bp) protein (417aa)
mandelate racemase n=1 Tax=Schlesneria paludicola RepID=UPI00029A840F
Uncharacterized protein {ECO:0000313|EMBL:EDL61140.1}; TaxID=344747 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Gimesia.;" source="Gimesia maris DSM 8797.;"
mandelate racemase
2019_SCN_bioreactor_t3_planktonic_scaffold_62562_13
unknown

Not on your lists

15541..16041
DNA (501bp) protein (167aa)
hypothetical protein n=1 Tax=Schlesneria paludicola RepID=UPI00029A43A1
Displaying 13 items

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