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2019_SCN_bioreactor_t3_planktonic_scaffold_7079

Search features with annotation key words

Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
2019_SCN_bioreactor_t3_planktonic_scaffold_7079_1
Planctopirus limnophila, Planctopirus, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

1..2031
DNA (2031bp) protein (677aa)
SEC-C motif domain protein n=1 Tax=Schlesneria paludicola RepID=UPI00029AD454
SEC-C motif domain protein
SEC-C motif domain protein {ECO:0000313|EMBL:ADG70010.1}; TaxID=521674 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Planctopirus.;" source="Planctopirus limnophila (strain ATCC 43296 / DSM 3776 / IFAM 1008 /; 290) (Planctomyces limnophilus).;"
2019_SCN_bioreactor_t3_planktonic_scaffold_7079_2
Gimesia maris, Gimesia, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

2137..3255
DNA (1119bp) protein (373aa)
riboflavin biosynthesis protein RibD (EC:1.1.1.193 3.5.4.26)
diaminohydroxyphosphoribosylaminopyrimidine deaminase n=1 Tax=Schlesneria paludicola RepID=UPI00029B4D80
Riboflavin biosynthesis protein RibD {ECO:0000256|PIRNR:PIRNR006769}; TaxID=344747 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Gimesia.;" source="Gimesia maris DSM 8797.;"
2019_SCN_bioreactor_t3_planktonic_scaffold_7079_3
Planctopirus limnophila, Planctopirus, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(3394..4755)
DNA (1362bp) protein (454aa)
YTV domain-containing protein n=1 Tax=Schlesneria paludicola RepID=UPI00029A1505
YTV domain-containing protein
YTV domain protein {ECO:0000313|EMBL:ADG66781.1}; TaxID=521674 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Planctopirus.;" source="Planctopirus limnophila (strain ATCC 43296 / DSM 3776 / IFAM 1008 /; 290) (Planctomyces limnophilus).;"
2019_SCN_bioreactor_t3_planktonic_scaffold_7079_4
unknown

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comp(4865..5071)
DNA (207bp) protein (69aa)

This feature has no annotations

2019_SCN_bioreactor_t3_planktonic_scaffold_7079_5
unknown

Not on your lists

5243..5383
DNA (141bp) protein (47aa)

This feature has no annotations

2019_SCN_bioreactor_t3_planktonic_scaffold_7079_6
Opitutus terrae, Opitutus, Opitutales, Opitutae, Verrucomicrobia, Bacteria

Not on your lists

comp(5442..6221)
DNA (780bp) protein (260aa)
RNA methyltransferase n=1 Tax=Schlesneria paludicola RepID=UPI00029B137B
tRNA/rRNA methyltransferase SpoU
tRNA/rRNA methyltransferase (SpoU) {ECO:0000313|EMBL:ACB75074.1}; Flags: Precursor;; TaxID=452637 species="Bacteria; Verrucomicrobia; Opitutae; Opitutales; Opitutaceae; Opitutus.;" source="Opitutus terrae (strain DSM 11246 / PB90-1).;"
2019_SCN_bioreactor_t3_planktonic_scaffold_7079_7
Reticulomyxa filosa, Reticulomyxa, Eukaryota

Not on your lists

6937..8022
DNA (1086bp) protein (362aa)
Serine/threonine-protein kinase-like domain-containing protein n=1 Tax=Schlesneria paludicola RepID=UPI00029A5278
NB-ARC domain-containing protein {ECO:0000313|EMBL:ETO01393.1}; TaxID=46433 species="Eukaryota; Rhizaria; Foraminifera; Monothalamids; Reticulomyxidae; Reticulomyxa.;" source="Reticulomyxa filosa.;"
WD40 repeat-containing protein
2019_SCN_bioreactor_t3_planktonic_scaffold_7079_8
Gimesia maris, Gimesia, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(8039..8494)
DNA (456bp) protein (152aa)
hypothetical protein n=1 Tax=Schlesneria paludicola RepID=UPI00029A4AEE
UPF0178 protein PM8797T_13735 {ECO:0000256|HAMAP-Rule:MF_00489}; TaxID=344747 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Gimesia.;" source="Gimesia maris DSM 8797.;"
hypothetical protein
2019_SCN_bioreactor_t3_planktonic_scaffold_7079_9
Planctopirus limnophila, Planctopirus, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists


comp(8593..11211)
DNA (2619bp) protein (873aa)
alanyl-tRNA synthetase (EC:6.1.1.7)
Alanine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00036, ECO:0000256|SAAS:SAAS00015689}; EC=6.1.1.7 {ECO:0000256|HAMAP-Rule:MF_00036, ECO:0000256|SAAS:SAAS00015673};; Alanyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00036}; TaxID=521674 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Planctopirus.;" source="Planctopirus limnophila (strain ATCC 43296 / DSM 3776 / IFAM 1008 /; 290) (Planctomyces limnophilus).;"
alanyl-tRNA synthetase n=1 Tax=Schlesneria paludicola RepID=UPI00029ADE23
2019_SCN_bioreactor_t3_planktonic_scaffold_7079_10
RBG_16_Planctomycetes_64_10_curated, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

11420..12604
DNA (1185bp) protein (395aa)
chalcone synthase n=1 Tax=Schlesneria paludicola RepID=UPI00029AA4F6
chalcone synthase
Tax=RBG_16_Planctomycetes_64_10_curated
2019_SCN_bioreactor_t3_planktonic_scaffold_7079_11
Gimesia maris, Gimesia, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(12664..14151)
DNA (1488bp) protein (496aa)
PDZ/DHR/GLGF domain-containing protein n=1 Tax=Schlesneria paludicola RepID=UPI00029A1047
Protease DO {ECO:0000313|EMBL:EDL56696.1}; TaxID=344747 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Gimesia.;" source="Gimesia maris DSM 8797.;"
PDZ/DHR/GLGF domain-containing protein
2019_SCN_bioreactor_t3_planktonic_scaffold_7079_12
Rubinisphaera brasiliensis, Rubinisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists


comp(14372..15526)
DNA (1155bp) protein (385aa)
protein RecA n=1 Tax=Schlesneria paludicola RepID=UPI00029B35F7
recombinase A
Protein RecA {ECO:0000256|HAMAP-Rule:MF_00268, ECO:0000256|RuleBase:RU000526}; Recombinase A {ECO:0000256|HAMAP-Rule:MF_00268, ECO:0000256|RuleBase:RU000526}; TaxID=756272 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Rubinisphaera.;" source="Rubinisphaera brasiliensis (strain ATCC 49424 / DSM 5305 / JCM 21570 /; NBRC 103401 / IFAM 1448) (Planctomyces brasiliensis).;"
2019_SCN_bioreactor_t3_planktonic_scaffold_7079_13
Gimesia maris, Gimesia, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

15637..16749
DNA (1113bp) protein (371aa)
Queuine tRNA-ribosyltransferase {ECO:0000256|HAMAP-Rule:MF_00168, ECO:0000256|RuleBase:RU003777}; EC=2.4.2.29 {ECO:0000256|HAMAP-Rule:MF_00168, ECO:0000256|RuleBase:RU003777};; Guanine insertion enzyme {ECO:0000256|HAMAP-Rule:MF_00168}; tRNA-guanine transglycosylase {ECO:0000256|HAMAP-Rule:MF_00168}; TaxID=344747 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Gimesia.;" source="Gimesia maris DSM 8797.;"
tRNA-guanine transglycosylase (EC:2.4.2.29)
queuine tRNA-ribosyltransferase n=1 Tax=Schlesneria paludicola RepID=UPI00029A123D
2019_SCN_bioreactor_t3_planktonic_scaffold_7079_14
Planctopirus limnophila, Planctopirus, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

16991..17341
DNA (351bp) protein (117aa)
preprotein translocase subunit YajC n=1 Tax=Schlesneria paludicola RepID=UPI000299D9F8
preprotein translocase subunit YajC
Preprotein translocase, YajC subunit {ECO:0000313|EMBL:ADG67182.1}; TaxID=521674 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Planctopirus.;" source="Planctopirus limnophila (strain ATCC 43296 / DSM 3776 / IFAM 1008 /; 290) (Planctomyces limnophilus).;"
2019_SCN_bioreactor_t3_planktonic_scaffold_7079_15
Planctopirus limnophila, Planctopirus, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

17477..20551
DNA (3075bp) protein (1025aa)
protein-export membrane protein SecD n=1 Tax=Schlesneria paludicola RepID=UPI00029A5EB2
protein-export membrane protein SecD
Protein-export membrane protein SecD {ECO:0000313|EMBL:ADG67183.1}; TaxID=521674 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Planctopirus.;" source="Planctopirus limnophila (strain ATCC 43296 / DSM 3776 / IFAM 1008 /; 290) (Planctomyces limnophilus).;"
2019_SCN_bioreactor_t3_planktonic_scaffold_7079_16
unknown

Not on your lists

comp(20488..20679)
DNA (192bp) protein (64aa)

This feature has no annotations

2019_SCN_bioreactor_t3_planktonic_scaffold_7079_17
Gimesia maris, Gimesia, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(20799..22487)
DNA (1689bp) protein (563aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=344747 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Gimesia.;" source="Gimesia maris DSM 8797.;"
histidine kinase n=1 Tax=Schlesneria paludicola RepID=UPI00029A2A4B
GAF sensor signal transduction histidine kinase
2019_SCN_bioreactor_t3_planktonic_scaffold_7079_18
unknown

Not on your lists

comp(22752..23093)
DNA (342bp) protein (114aa)
response regulator receiver protein n=1 Tax=Schlesneria paludicola RepID=UPI00029A9703
2019_SCN_bioreactor_t3_planktonic_scaffold_7079_19
Fibrisoma limi, Fibrisoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

23533..24405
DNA (873bp) protein (291aa)
Inositol oxygenase {ECO:0000313|EMBL:CCH56303.1}; EC=1.13.99.1 {ECO:0000313|EMBL:CCH56303.1};; TaxID=1185876 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Fibrisoma.;" source="Fibrisoma limi BUZ 3.;"
Inositol oxygenase (EC:1.13.99.1)
inositol oxygenase n=1 Tax=Schlesneria paludicola RepID=UPI00029A1C10
2019_SCN_bioreactor_t3_planktonic_scaffold_7079_20
Pirellula staleyi, Pirellula, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(24558..25943)
DNA (1386bp) protein (462aa)
hypothetical protein n=1 Tax=Schlesneria paludicola RepID=UPI00029A51AC
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADB18014.1}; Flags: Precursor;; TaxID=530564 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Pirellula.;" source="Pirellula staleyi (strain ATCC 27377 / DSM 6068 / ICPB 4128) (Pirella; staleyi).;"
2019_SCN_bioreactor_t3_planktonic_scaffold_7079_21
unknown

Not on your lists

comp(25988..27415)
DNA (1428bp) protein (476aa)
hypothetical protein n=1 Tax=Schlesneria paludicola RepID=UPI00029B336C
2019_SCN_bioreactor_t3_planktonic_scaffold_7079_22
Planctopirus limnophila, Planctopirus, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(27674..29485)
DNA (1812bp) protein (604aa)
MFS transporter n=1 Tax=Schlesneria paludicola RepID=UPI00029AF468
major facilitator superfamily protein
Major facilitator superfamily MFS_1 {ECO:0000313|EMBL:ADG67247.1}; TaxID=521674 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Planctopirus.;" source="Planctopirus limnophila (strain ATCC 43296 / DSM 3776 / IFAM 1008 /; 290) (Planctomyces limnophilus).;"
2019_SCN_bioreactor_t3_planktonic_scaffold_7079_23
Planctopirus limnophila, Planctopirus, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(29808..30695)
DNA (888bp) protein (296aa)
signal peptide protein n=1 Tax=Schlesneria paludicola RepID=UPI00029A4CA2
cycloartenol synthase-like protein
Cycloartenol synthase-like protein {ECO:0000313|EMBL:ADG69859.1}; TaxID=521674 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Planctopirus.;" source="Planctopirus limnophila (strain ATCC 43296 / DSM 3776 / IFAM 1008 /; 290) (Planctomyces limnophilus).;"
Displaying 23 items

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