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2019_SCN_bioreactor_t3_planktonic_scaffold_34676

Search features with annotation key words

Displaying 7 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
2019_SCN_bioreactor_t3_planktonic_scaffold_34676_1
Gimesia maris, Gimesia, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

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391..891
DNA (501bp) protein (167aa)
elongation factor P n=1 Tax=Schlesneria paludicola RepID=UPI00029ACF2F
Elongation factor P {ECO:0000256|HAMAP-Rule:MF_00141}; Short=EF-P {ECO:0000256|HAMAP-Rule:MF_00141};; TaxID=344747 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Gimesia.;" source="Gimesia maris DSM 8797.;"
translation elongation factor P (EF-P)
2019_SCN_bioreactor_t3_planktonic_scaffold_34676_2
Planctopirus limnophila, Planctopirus, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

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1157..2416
DNA (1260bp) protein (420aa)
MiaB family RNA modification protein (EC:1.3.1.74)
tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase {ECO:0000256|HAMAP-Rule:MF_01864, ECO:0000256|SAAS:SAAS00078006}; EC=2.8.4.3 {ECO:0000256|HAMAP-Rule:MF_01864, ECO:0000256|SAAS:SAAS00077858};; (Dimethylallyl)adenosine tRNA methylthiotransferase MiaB {ECO:0000256|HAMAP-Rule:MF_01864}; tRNA-i(6)A37 methylthiotransferase {ECO:0000256|HAMAP-Rule:MF_01864}; TaxID=521674 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Planctopirus.;" source="Planctopirus limnophila (strain ATCC 43296 / DSM 3776 / IFAM 1008 /; 290) (Planctomyces limnophilus).;"
(dimethylallyl)adenosine tRNA methylthiotransferase n=1 Tax=Schlesneria paludicola RepID=UPI00029A0256
2019_SCN_bioreactor_t3_planktonic_scaffold_34676_3
Planctopirus limnophila, Planctopirus, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

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2840..3835
DNA (996bp) protein (332aa)
quinolinate synthetase complex subunit alpha (EC:2.1.1.63)
Quinolinate synthase {ECO:0000256|SAAS:SAAS00096027}; EC=2.5.1.72 {ECO:0000256|SAAS:SAAS00096027};; TaxID=521674 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Planctopirus.;" source="Planctopirus limnophila (strain ATCC 43296 / DSM 3776 / IFAM 1008 /; 290) (Planctomyces limnophilus).;"
quinolinate synthetase n=1 Tax=Schlesneria paludicola RepID=UPI00029A603B
2019_SCN_bioreactor_t3_planktonic_scaffold_34676_4
Phycisphaera mikurensis, Phycisphaera, Phycisphaerales, Phycisphaerae, Planctomycetes, Bacteria

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comp(3897..5504)
DNA (1608bp) protein (536aa)
hypothetical protein n=1 Tax=Schlesneria paludicola RepID=UPI00029A88C2
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAM04957.1}; TaxID=1142394 species="Bacteria; Planctomycetes; Phycisphaerae; Phycisphaerales; Phycisphaeraceae; Phycisphaera.;" source="Phycisphaera mikurensis (strain NBRC 102666 / KCTC 22515 /; FYK2301M01).;"
2019_SCN_bioreactor_t3_planktonic_scaffold_34676_5
unknown

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5567..5815
DNA (249bp) protein (83aa)

This feature has no annotations

2019_SCN_bioreactor_t3_planktonic_scaffold_34676_6
Crassostrea gigas, Crassostrea, Ostreoida, Pteriomorphia, Mollusca, Metazoa

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5785..6591
DNA (807bp) protein (269aa)
transporter n=1 Tax=Schlesneria paludicola RepID=UPI000299D39A
Collagen alpha-5(VI) chain {ECO:0000313|EMBL:EKC38979.1}; TaxID=29159 species="Eukaryota; Metazoa; Lophotrochozoa; Mollusca; Bivalvia; Pteriomorphia; Ostreoida; Ostreoidea; Ostreidae; Crassostrea.;" source="Crassostrea gigas (Pacific oyster) (Crassostrea angulata).;"
hypothetical protein
2019_SCN_bioreactor_t3_planktonic_scaffold_34676_7
RLO_PLX_64_10, Bacteria

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comp(6630..7661)
DNA (1032bp) protein (344aa)
dihydroorotase n=1 Tax=Schlesneria paludicola RepID=UPI00029A8824
dihydroorotase
Tax=RIFCSPLOWO2_12_FULL_PLX_64_10_curated
Displaying 7 items

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