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2019_SCN_bioreactor_t3_planktonic_scaffold_82191

Search features with annotation key words

Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
2019_SCN_bioreactor_t3_planktonic_scaffold_82191_1
Planctopirus limnophila, Planctopirus, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(1..726)
DNA (726bp) protein (242aa)
ribonuclease E n=1 Tax=Schlesneria paludicola RepID=UPI00029A13A6
ribonuclease, Rne/Rng family
Ribonuclease, Rne/Rng family {ECO:0000313|EMBL:ADG66208.1}; TaxID=521674 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Planctopirus.;" source="Planctopirus limnophila (strain ATCC 43296 / DSM 3776 / IFAM 1008 /; 290) (Planctomyces limnophilus).;"
2019_SCN_bioreactor_t3_planktonic_scaffold_82191_2
unknown

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845..1306
DNA (462bp) protein (154aa)

This feature has no annotations

2019_SCN_bioreactor_t3_planktonic_scaffold_82191_3
Planctopirus limnophila, Planctopirus, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(1419..3167)
DNA (1749bp) protein (583aa)
Phosphoenolpyruvate-protein phosphotransferase {ECO:0000256|PIRNR:PIRNR000732}; EC=2.7.3.9 {ECO:0000256|PIRNR:PIRNR000732};; Phosphotransferase system, enzyme I {ECO:0000256|PIRNR:PIRNR000732}; TaxID=521674 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Planctopirus.;" source="Planctopirus limnophila (strain ATCC 43296 / DSM 3776 / IFAM 1008 /; 290) (Planctomyces limnophilus).;"
phosphoenolpyruvate-protein phosphotransferase n=1 Tax=Schlesneria paludicola RepID=UPI00029AB9FC
phosphoenolpyruvate-protein phosphotransferase
2019_SCN_bioreactor_t3_planktonic_scaffold_82191_4
Rhodopirellula europaea, Rhodopirellula, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(3392..3682)
DNA (291bp) protein (97aa)
HPr family phosphocarrier protein n=1 Tax=Schlesneria paludicola RepID=UPI000299E1ED
HPr family phosphocarrier protein
Phosphotransferase system, phosphocarrier protein HPr {ECO:0000313|EMBL:EMB13688.1}; TaxID=1263867 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Rhodopirellula.;" source="Rhodopirellula europaea 6C.;"
2019_SCN_bioreactor_t3_planktonic_scaffold_82191_5
Planctopirus limnophila, Planctopirus, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(3765..4235)
DNA (471bp) protein (157aa)
PTS fructose transporter subunit IIA n=1 Tax=Schlesneria paludicola RepID=UPI00029ACE6F
phosphoenolpyruvate-dependent sugar phosphotransferase system EIIA 2
Phosphoenolpyruvate-dependent sugar phosphotransferase system EIIA 2 {ECO:0000313|EMBL:ADG66212.1}; TaxID=521674 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Planctopirus.;" source="Planctopirus limnophila (strain ATCC 43296 / DSM 3776 / IFAM 1008 /; 290) (Planctomyces limnophilus).;"
2019_SCN_bioreactor_t3_planktonic_scaffold_82191_6
Planctopirus limnophila, Planctopirus, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(4278..4643)
DNA (366bp) protein (122aa)
ribosomal subunit interface protein n=1 Tax=Schlesneria paludicola RepID=UPI00029B1177
ribosomal subunit interface protein
Ribosomal subunit interface protein {ECO:0000313|EMBL:ADG66213.1}; TaxID=521674 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Planctopirus.;" source="Planctopirus limnophila (strain ATCC 43296 / DSM 3776 / IFAM 1008 /; 290) (Planctomyces limnophilus).;"
2019_SCN_bioreactor_t3_planktonic_scaffold_82191_7
unknown

Not on your lists

comp(5273..5674)
DNA (402bp) protein (134aa)
hypothetical protein n=1 Tax=Schlesneria paludicola RepID=UPI00029AE01C
2019_SCN_bioreactor_t3_planktonic_scaffold_82191_8
unknown

Not on your lists

comp(5847..6326)
DNA (480bp) protein (160aa)
hypothetical protein n=1 Tax=Schlesneria paludicola RepID=UPI00029A4512
2019_SCN_bioreactor_t3_planktonic_scaffold_82191_9
Gimesia maris, Gimesia, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(6683..7771)
DNA (1089bp) protein (363aa)
UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase {ECO:0000256|RuleBase:RU004136}; EC=6.3.2.10 {ECO:0000256|RuleBase:RU004136};; TaxID=344747 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Gimesia.;" source="Gimesia maris DSM 8797.;"
UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6- diaminopimelate--D-alanyl-D-alanyl ligase n=1 Tax=Schlesneria paludicola RepID=UPI00029AB6E7
UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanyl ligase
2019_SCN_bioreactor_t3_planktonic_scaffold_82191_10
unknown

Not on your lists

7962..8657
DNA (696bp) protein (232aa)

This feature has no annotations

2019_SCN_bioreactor_t3_planktonic_scaffold_82191_11
Planctopirus limnophila, Planctopirus, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(9581..11392)
DNA (1812bp) protein (604aa)
hypothetical protein n=1 Tax=Schlesneria paludicola RepID=UPI00029AC8F6
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADG65921.1}; TaxID=521674 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Planctopirus.;" source="Planctopirus limnophila (strain ATCC 43296 / DSM 3776 / IFAM 1008 /; 290) (Planctomyces limnophilus).;"
2019_SCN_bioreactor_t3_planktonic_scaffold_82191_12
Planctopirus limnophila, Planctopirus, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

12190..15006
DNA (2817bp) protein (939aa)
2-oxoglutarate dehydrogenase E1 n=1 Tax=Schlesneria paludicola RepID=UPI00029B1554
2-oxoglutarate dehydrogenase, E1 subunit
2-oxoglutarate dehydrogenase, E1 subunit {ECO:0000313|EMBL:ADG66469.1}; TaxID=521674 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Planctopirus.;" source="Planctopirus limnophila (strain ATCC 43296 / DSM 3776 / IFAM 1008 /; 290) (Planctomyces limnophilus).;"
2019_SCN_bioreactor_t3_planktonic_scaffold_82191_13
Planctopirus limnophila, Planctopirus, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

15097..16332
DNA (1236bp) protein (412aa)
Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex; EC=2.3.1.61;; 2-oxoglutarate dehydrogenase complex component E2 {ECO:0000256|RuleBase:RU361138}; TaxID=521674 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Planctopirus.;" source="Planctopirus limnophila (strain ATCC 43296 / DSM 3776 / IFAM 1008 /; 290) (Planctomyces limnophilus).;"
dihydrolipoamide succinyltransferase n=1 Tax=Schlesneria paludicola RepID=UPI00029B0B12
2-oxoglutarate dehydrogenase, E2 subunit, dihydrolipoamide succinyltransferase
2019_SCN_bioreactor_t3_planktonic_scaffold_82191_14
Planctopirus limnophila, Planctopirus, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

16393..17778
DNA (1386bp) protein (462aa)
Dihydrolipoyl dehydrogenase {ECO:0000256|RuleBase:RU003692}; EC=1.8.1.4 {ECO:0000256|RuleBase:RU003692};; TaxID=521674 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Planctopirus.;" source="Planctopirus limnophila (strain ATCC 43296 / DSM 3776 / IFAM 1008 /; 290) (Planctomyces limnophilus).;"
dihydrolipoamide dehydrogenase n=1 Tax=Schlesneria paludicola RepID=UPI00029AA379
dihydrolipoamide dehydrogenase
2019_SCN_bioreactor_t3_planktonic_scaffold_82191_15
Planctopirus limnophila, Planctopirus, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

17916..18686
DNA (771bp) protein (257aa)
biotin/lipoate A/B protein ligase n=1 Tax=Schlesneria paludicola RepID=UPI00029AB584
biotin/lipoate A/B protein ligase
Biotin/lipoate A/B protein ligase {ECO:0000313|EMBL:ADG68435.1}; TaxID=521674 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Planctopirus.;" source="Planctopirus limnophila (strain ATCC 43296 / DSM 3776 / IFAM 1008 /; 290) (Planctomyces limnophilus).;"
Displaying 15 items

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