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2019_SCN_bioreactor_t3_planktonic_scaffold_12909

Search features with annotation key words

Displaying 7 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
2019_SCN_bioreactor_t3_planktonic_scaffold_12909_1
Corynebacterium halotolerans, Corynebacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(1..321)
DNA (321bp) protein (107aa)
hypothetical protein n=1 Tax=Schlesneria paludicola RepID=UPI000299E084
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGF71770.1}; TaxID=1121362 species="Bacteria; Actinobacteria; Corynebacteriales; Corynebacteriaceae; Corynebacterium.;" source="Corynebacterium halotolerans YIM 70093 = DSM 44683.;"
2019_SCN_bioreactor_t3_planktonic_scaffold_12909_2
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(442..1287)
DNA (846bp) protein (282aa)
hypothetical protein n=1 Tax=Schlesneria paludicola RepID=UPI00029B3FDC
hypothetical protein
Variovorax paradoxus strain MEDvA23 contig_5, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ36853.1}; TaxID=34073 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus.;"
2019_SCN_bioreactor_t3_planktonic_scaffold_12909_3
Blastopirellula marina, Blastopirellula, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

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1340..1921
DNA (582bp) protein (194aa)
hypothetical protein n=1 Tax=Schlesneria paludicola RepID=UPI00029B0B82
Uncharacterized protein {ECO:0000313|EMBL:EAQ80866.1}; TaxID=314230 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Blastopirellula.;" source="Blastopirellula marina DSM 3645.;"
2019_SCN_bioreactor_t3_planktonic_scaffold_12909_4
unknown

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1905..2153
DNA (249bp) protein (83aa)

This feature has no annotations

2019_SCN_bioreactor_t3_planktonic_scaffold_12909_5
Planctopirus limnophila, Planctopirus, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

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2246..2938
DNA (693bp) protein (231aa)
alpha-isopropylmalate/homocitrate synthase family transferase n=1 Tax=Schlesneria paludicola RepID=UPI00029AA8F3
2-isopropylmalate synthase
2-isopropylmalate synthase/homocitrate synthase family protein {ECO:0000313|EMBL:ADG67897.1}; TaxID=521674 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Planctopirus.;" source="Planctopirus limnophila (strain ATCC 43296 / DSM 3776 / IFAM 1008 /; 290) (Planctomyces limnophilus).;"
2019_SCN_bioreactor_t3_planktonic_scaffold_12909_6
Planctopirus limnophila, Planctopirus, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

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2998..3735
DNA (738bp) protein (246aa)
alpha-isopropylmalate/homocitrate synthase family transferase n=1 Tax=Schlesneria paludicola RepID=UPI00029AA8F3
2-isopropylmalate synthase
2-isopropylmalate synthase/homocitrate synthase family protein {ECO:0000313|EMBL:ADG67897.1}; TaxID=521674 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Planctopirus.;" source="Planctopirus limnophila (strain ATCC 43296 / DSM 3776 / IFAM 1008 /; 290) (Planctomyces limnophilus).;"
2019_SCN_bioreactor_t3_planktonic_scaffold_12909_7
Planctopirus limnophila, Planctopirus, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

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3931..6042
DNA (2112bp) protein (704aa)
Valine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_02004, ECO:0000256|SAAS:SAAS00026840}; EC=6.1.1.9 {ECO:0000256|HAMAP-Rule:MF_02004, ECO:0000256|SAAS:SAAS00105779};; Valyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_02004}; TaxID=521674 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Planctopirus.;" source="Planctopirus limnophila (strain ATCC 43296 / DSM 3776 / IFAM 1008 /; 290) (Planctomyces limnophilus).;"
valyl-tRNA synthetase n=1 Tax=Schlesneria paludicola RepID=UPI00029B5368
valyl-tRNA synthetase
Displaying 7 items

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