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2019_SCN_bioreactor_t3_planktonic_scaffold_11020_6

Organism: 2019_SCN_bioreactor_t3_planktonic_Planctomycetes_54_6

near complete RP 46 / 55 BSCG 44 / 51 MC: 2 ASCG 12 / 38 MC: 3
Location: 6260..6592

Top 3 Functional Annotations

Value Algorithm Source
GntR family transcriptional regulator n=1 Tax=Schlesneria paludicola RepID=UPI00029A1F2E similarity UNIREF
DB: UNIREF100
  • Identity: 98.0
  • Coverage: 100.0
  • Bit_score: 192
  • Evalue 1.50e-46
GntR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 47.8
  • Coverage: 90.0
  • Bit_score: 74
  • Evalue 1.60e-11
Transcriptional regulator, GntR family {ECO:0000313|EMBL:ADH91356.1}; TaxID=639283 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Starkeya.;" source="Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 /; NBRC 12443 / NCIB 9113).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 47.8
  • Coverage: 90.0
  • Bit_score: 74
  • Evalue 8.20e-11

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Taxonomy

Starkeya novella → Starkeya → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 333
ATGACGCAAGTGGCAAGAAGCTCACAACTGGATTCGACGTACGATTACATCTACGAAAAGCTTTCGCGCGGTGAGCTTGAGCCAGGGCAAAAGCTGTCTCGCCGGAAACTGGCGGAAGAAATTGGCGTCAGCCCCGCCCTCGTGCAACACGCTCTCGGTCAGTTGGAGAAAGCGGGGCTTGTCGAATGTCGCGCACAAAGCGGAACGTACGTCCGTGAATTAACGGCCGAAGAGTTCGCCAATCTATGCGATCTTCGAGAACTGATCGAACCCTATGCGGCAGCGCGAGCGGCCGAGCGGAGAAAGAGGTTTGGAAGCTCCATCGCGAAATGA
PROTEIN sequence
Length: 111
MTQVARSSQLDSTYDYIYEKLSRGELEPGQKLSRRKLAEEIGVSPALVQHALGQLEKAGLVECRAQSGTYVRELTAEEFANLCDLRELIEPYAAARAAERRKRFGSSIAK*