ggKbase home page

2019_SCN_bioreactor_t3_planktonic_scaffold_11020

Search features with annotation key words

Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
2019_SCN_bioreactor_t3_planktonic_scaffold_11020_1
RBG_16_Planctomycetes_64_10_curated, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

1..645
DNA (645bp) protein (215aa)
sugar ABC transporter n=1 Tax=Schlesneria paludicola RepID=UPI00029A605F
ABC transporter
Tax=RBG_16_Planctomycetes_64_10_curated
2019_SCN_bioreactor_t3_planktonic_scaffold_11020_2
Gimesia maris, Gimesia, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(707..1663)
DNA (957bp) protein (319aa)
methyltransferase type 11 n=1 Tax=Schlesneria paludicola RepID=UPI00029B5169
Uncharacterized protein {ECO:0000313|EMBL:EDL56265.1}; TaxID=344747 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Gimesia.;" source="Gimesia maris DSM 8797.;"
type 11 methyltransferase
2019_SCN_bioreactor_t3_planktonic_scaffold_11020_3

Not on your lists

comp(1723..2655)
DNA (933bp) protein (311aa)
ftr; formylmethanofuran--tetrahydromethanopterin formyltransferase (EC:2.3.1.101)
formylmethanofuran--tetrahydromethanopterin formyltransferase n=1 Tax=Schlesneria paludicola RepID=UPI00029B47B3
Formyltransferase/hydrolase complex D subunit {ECO:0000313|EMBL:ABA02221.1}; Flags: Fragment;; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
2019_SCN_bioreactor_t3_planktonic_scaffold_11020_4
Rhodopirellula europaea, Rhodopirellula, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(2685..3293)
DNA (609bp) protein (203aa)
5-formyltetrahydrofolate cyclo-ligase {ECO:0000256|RuleBase:RU361279}; EC=6.3.3.2 {ECO:0000256|RuleBase:RU361279};; TaxID=1263868 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Rhodopirellula.;" source="Rhodopirellula europaea SH398.;"
mthfs; 5-formyltetrahydrofolate cyclo-ligase (EC:6.3.3.2)
5-formyltetrahydrofolate cyclo-ligase n=1 Tax=Schlesneria paludicola RepID=UPI00029A9268
2019_SCN_bioreactor_t3_planktonic_scaffold_11020_5
Gimesia maris, Gimesia, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

3497..6097
DNA (2601bp) protein (867aa)
UvrABC system protein A (UvrA protein) (Excinuclease ABC subunit A)(Excinuclease ATPase subunit) n=1 Tax=Schlesneria paludicola RepID=UPI00029A2710
Excinuclease ABC subunit A {ECO:0000313|EMBL:EDL62449.1}; TaxID=344747 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Gimesia.;" source="Gimesia maris DSM 8797.;"
uvrA; excinuclease ABC subunit A
2019_SCN_bioreactor_t3_planktonic_scaffold_11020_6
Starkeya novella, Starkeya, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6260..6592
DNA (333bp) protein (111aa)
GntR family transcriptional regulator n=1 Tax=Schlesneria paludicola RepID=UPI00029A1F2E
GntR family transcriptional regulator
Transcriptional regulator, GntR family {ECO:0000313|EMBL:ADH91356.1}; TaxID=639283 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Starkeya.;" source="Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 /; NBRC 12443 / NCIB 9113).;"
2019_SCN_bioreactor_t3_planktonic_scaffold_11020_7
BJP_08E140C01_Desulfomicrobium_58_14, Desulfomicrobium, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6589..6882
DNA (294bp) protein (98aa)
GntR family transcriptional regulator n=1 Tax=Schlesneria paludicola RepID=UPI00029A1F2E
GntR family transcriptional regulator
Tax=BJP_08E140C01_Desulfomicrobium_58_14
2019_SCN_bioreactor_t3_planktonic_scaffold_11020_8
Rubinisphaera brasiliensis, Rubinisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

7539..8504
DNA (966bp) protein (322aa)
hypothetical protein n=1 Tax=Schlesneria paludicola RepID=UPI00029AFF13
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADY58538.1}; Flags: Precursor;; TaxID=756272 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Rubinisphaera.;" source="Rubinisphaera brasiliensis (strain ATCC 49424 / DSM 5305 / JCM 21570 /; NBRC 103401 / IFAM 1448) (Planctomyces brasiliensis).;"
2019_SCN_bioreactor_t3_planktonic_scaffold_11020_9
unknown

Not on your lists

8602..9018
DNA (417bp) protein (139aa)
hypothetical protein n=1 Tax=Schlesneria paludicola RepID=UPI00029B2E84
2019_SCN_bioreactor_t3_planktonic_scaffold_11020_10
RBG_16_Planctomycetes_64_12_curated, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

9142..10056
DNA (915bp) protein (305aa)
dihydrodipicolinate synthetase n=1 Tax=Schlesneria paludicola RepID=UPI00029A0205
Tax=RBG_16_Planctomycetes_64_12_curated
2019_SCN_bioreactor_t3_planktonic_scaffold_11020_11
RBG_16_Planctomycetes_64_12_curated, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

10083..10838
DNA (756bp) protein (252aa)
myo-inositol 2-dehydrogenase n=1 Tax=Schlesneria paludicola RepID=UPI00029A81F3
oxidoreductase domain-containing protein
Tax=RBG_16_Planctomycetes_64_12_curated
2019_SCN_bioreactor_t3_planktonic_scaffold_11020_12
RLO_PLX_64_10, Bacteria

Not on your lists

10825..11118
DNA (294bp) protein (98aa)
myo-inositol 2-dehydrogenase n=1 Tax=Schlesneria paludicola RepID=UPI00029A81F3
Tax=RIFCSPLOWO2_12_FULL_PLX_64_10_curated
2019_SCN_bioreactor_t3_planktonic_scaffold_11020_13
Gimesia maris, Gimesia, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

11153..12268
DNA (1116bp) protein (372aa)
mandelate racemase n=1 Tax=Schlesneria paludicola RepID=UPI00029A5F09
Uncharacterized protein {ECO:0000313|EMBL:EDL61140.1}; TaxID=344747 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Gimesia.;" source="Gimesia maris DSM 8797.;"
mandelate racemase/muconate lactonizing protein
2019_SCN_bioreactor_t3_planktonic_scaffold_11020_14
CG_Arma_01, Armatimonadetes, Bacteria

Not on your lists

12301..12723
DNA (423bp) protein (141aa)
hypothetical protein n=1 Tax=Schlesneria paludicola RepID=UPI00029B24F9
Tax=CG_Arma_01
Displaying 14 items

View Taxonomy