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2019_SCN_bioreactor_t3_planktonic_scaffold_22830_3

Organism: 2019_SCN_bioreactor_t3_planktonic_Planctomycetes_54_6

near complete RP 46 / 55 BSCG 44 / 51 MC: 2 ASCG 12 / 38 MC: 3
Location: comp(3207..4238)

Top 3 Functional Annotations

Value Algorithm Source
Pseudouridine synthase {ECO:0000256|RuleBase:RU362028}; EC=5.4.99.- {ECO:0000256|RuleBase:RU362028};; TaxID=530564 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Pirellula.;" source="Pirellula staleyi (strain ATCC 27377 / DSM 6068 / ICPB 4128) (Pirella; staleyi).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 45.4
  • Coverage: 335.0
  • Bit_score: 281
  • Evalue 1.10e-72
RluA family pseudouridine synthase n=1 Tax=Schlesneria paludicola RepID=UPI00029B3F2F similarity UNIREF
DB: UNIREF100
  • Identity: 94.4
  • Coverage: 341.0
  • Bit_score: 644
  • Evalue 4.40e-182
RluA family pseudouridine synthase similarity KEGG
DB: KEGG
  • Identity: 45.4
  • Coverage: 335.0
  • Bit_score: 281
  • Evalue 2.10e-73

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Taxonomy

Pirellula staleyi → Pirellula → Planctomycetales → Planctomycetia → Planctomycetes → Bacteria

Sequences

DNA sequence
Length: 1032
ATGGCCGTGAATAGAACTTCGAACAATCGATTTGAACAGATTGCGCCGTCCAGGATGCCCGAATCCGTCTCGTTTACTGTGTCTGAGGATCTCGTTGGAAAAACGGTACTGGCCGTCTTGCGAATCGCCATTCCGGGCGAATCGTGGTCGAAGCTTCGGCAGCGTCTCGAACGCGCCCAAGTCTCCGTGAATGGTGTTGCGTGTCTCAGTGAAGCCAGGCGGGTCGAGGCTGGTGACGTCATTGTGGCACACGATCGACGCGTTGAAACACCTCAACCAAACGACGTTCAGATCCTGTTGATCGATCCTCACGTGGTTGTCGTCGAAAAGCCCTCTGGCATGATGACGCATCGGCGTCCTGAAGAACGCAATTGGCCCGCTGAAAAGAAAGCGCTGCATCCCTCGCTCGATGAAGCGGTGATGGAGTTGATTGTCCGTCGTTCAACGGCCAATGGAAACAAGAATCAGCGGACGCGGCTACCTGCGTTGCGTCTGGTACACCGTCTTGATCGTGATACAAGTGGCCTATTGGTGATGGCACGATCGGCCGAGGCGGAAGAGAAACTCATTGGGCAGTTCCGTCGTCATACAGCACATCGAGTTTACTGGGCTATCGTACACGGTCATCCCATCGCGGAAACGATCACTTCGAATCTGGTTCGTGACCGTGGCGACGGCCGACGTGGTAGCGTCAATAATCCCAAAATGGGGCAGCGCGCGGTCACCCACGTACGGCCACTTGAAGATCTTGGGAAGTACTCATTGGTCGAATGCCAACTTGAGACCGGACGTACCAACCAAATCCGGATCCATTTGTCCGAGCGTGGCCACCTGGTCTGTGGCGATGTGAAGTACAGTCAGCCGTTTGCCGCGAAGCAAGTCGATGATCGCAGTAGAGCTCCACGTTTGGCCCTGCATGCGGCCGAGCTTGGGTTTGCACATCCACTGACCGGTGAGGAGCTTCGATTTCGGATGCCATTCCCACATGATTTGAGTGCGTTCTACGAAAACCTGCGTGCGACGCGACGTTAA
PROTEIN sequence
Length: 344
MAVNRTSNNRFEQIAPSRMPESVSFTVSEDLVGKTVLAVLRIAIPGESWSKLRQRLERAQVSVNGVACLSEARRVEAGDVIVAHDRRVETPQPNDVQILLIDPHVVVVEKPSGMMTHRRPEERNWPAEKKALHPSLDEAVMELIVRRSTANGNKNQRTRLPALRLVHRLDRDTSGLLVMARSAEAEEKLIGQFRRHTAHRVYWAIVHGHPIAETITSNLVRDRGDGRRGSVNNPKMGQRAVTHVRPLEDLGKYSLVECQLETGRTNQIRIHLSERGHLVCGDVKYSQPFAAKQVDDRSRAPRLALHAAELGFAHPLTGEELRFRMPFPHDLSAFYENLRATRR*