ggKbase home page

2019_SCN_bioreactor_t3_planktonic_scaffold_38712_3

Organism: 2019_SCN_bioreactor_t3_planktonic_Planctomycetes_54_6

near complete RP 46 / 55 BSCG 44 / 51 MC: 2 ASCG 12 / 38 MC: 3
Location: comp(1801..2316)

Top 3 Functional Annotations

Value Algorithm Source
Methionyl-tRNA formyltransferase {ECO:0000256|HAMAP-Rule:MF_00182, ECO:0000256|SAAS:SAAS00043681}; EC=2.1.2.9 {ECO:0000256|HAMAP-Rule:MF_00182, ECO:0000256|SAAS:SAAS00150580};; TaxID=521674 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Planctopirus.;" source="Planctopirus limnophila (strain ATCC 43296 / DSM 3776 / IFAM 1008 /; 290) (Planctomyces limnophilus).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 47.5
  • Coverage: 179.0
  • Bit_score: 154
  • Evalue 9.70e-35
methionyl-tRNA formyltransferase n=1 Tax=Schlesneria paludicola RepID=UPI00029A084C similarity UNIREF
DB: UNIREF100
  • Identity: 79.7
  • Coverage: 172.0
  • Bit_score: 275
  • Evalue 2.00e-71
methionyl-tRNA formyltransferase similarity KEGG
DB: KEGG
  • Identity: 47.5
  • Coverage: 179.0
  • Bit_score: 154
  • Evalue 1.90e-35

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Planctopirus limnophila → Planctopirus → Planctomycetales → Planctomycetia → Planctomycetes → Bacteria

Sequences

DNA sequence
Length: 516
ATGTTGGGCAAAGCCAGCATCCCGATCGCCCCAAACGAAACGACGGGTGAGCTCGAACAACGCTTGGCAGATCTGGCGATTCCACTCACACAGCGCGTGATCAGCGAAATTGAAGCCGGCACGGTCAAACGAATCGTGCAAGTCGAATCGCTCGCGACCCATGTTCGAAAGCTGTCAAAAACGGACGGACTTATCCCCTGGACCAAGTCCGCAGTGGAAGTCGAGCGACACGTGCGTGGAATGCAACCGTGGCCTGGACCATTCAGCCATCTGCACCAAACTGACAAGCCCCCCCTGCGCCTGCAAATTCTTTCTGTTCGGACTCAGAACCCCAGCGCGAATTCGACAAGTCCCCCACCAGGTACTGTCATTTCGGTCACACCTGAAACACTGACAGTGCGATGCGGAGAAGGTGCGGTCGATCTTTTGACCGTCCAGCCAGATGGGAAACGCCAAATGCTCGCCGCCGACTTCCTGCGAGGCCGCAAAGTCGCCATCGGCGATACTTTAGGTTAG
PROTEIN sequence
Length: 172
MLGKASIPIAPNETTGELEQRLADLAIPLTQRVISEIEAGTVKRIVQVESLATHVRKLSKTDGLIPWTKSAVEVERHVRGMQPWPGPFSHLHQTDKPPLRLQILSVRTQNPSANSTSPPPGTVISVTPETLTVRCGEGAVDLLTVQPDGKRQMLAADFLRGRKVAIGDTLG*