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2019_SCN_bioreactor_t3_planktonic_scaffold_38712

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
2019_SCN_bioreactor_t3_planktonic_scaffold_38712_1
unknown

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64..348
DNA (285bp) protein (95aa)

This feature has no annotations

2019_SCN_bioreactor_t3_planktonic_scaffold_38712_2
Gimesia maris, Gimesia, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

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1056..1733
DNA (678bp) protein (226aa)
NAD(P)H-hydrate epimerase {ECO:0000256|HAMAP-Rule:MF_01966}; EC=5.1.99.6 {ECO:0000256|HAMAP-Rule:MF_01966};; NAD(P)HX epimerase {ECO:0000256|HAMAP-Rule:MF_01966}; TaxID=344747 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Gimesia.;" source="Gimesia maris DSM 8797.;"
hypothetical protein n=1 Tax=Schlesneria paludicola RepID=UPI00029AF5B6
hypothetical protein
2019_SCN_bioreactor_t3_planktonic_scaffold_38712_3
Planctopirus limnophila, Planctopirus, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

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comp(1801..2316)
DNA (516bp) protein (172aa)
Methionyl-tRNA formyltransferase {ECO:0000256|HAMAP-Rule:MF_00182, ECO:0000256|SAAS:SAAS00043681}; EC=2.1.2.9 {ECO:0000256|HAMAP-Rule:MF_00182, ECO:0000256|SAAS:SAAS00150580};; TaxID=521674 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Planctopirus.;" source="Planctopirus limnophila (strain ATCC 43296 / DSM 3776 / IFAM 1008 /; 290) (Planctomyces limnophilus).;"
methionyl-tRNA formyltransferase n=1 Tax=Schlesneria paludicola RepID=UPI00029A084C
methionyl-tRNA formyltransferase
2019_SCN_bioreactor_t3_planktonic_scaffold_38712_4
Gimesia maris, Gimesia, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

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comp(2345..2731)
DNA (387bp) protein (129aa)
Methionyl-tRNA formyltransferase {ECO:0000256|HAMAP-Rule:MF_00182, ECO:0000256|SAAS:SAAS00043681}; EC=2.1.2.9 {ECO:0000256|HAMAP-Rule:MF_00182, ECO:0000256|SAAS:SAAS00150580};; TaxID=344747 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Gimesia.;" source="Gimesia maris DSM 8797.;"
methionyl-tRNA formyltransferase n=1 Tax=Schlesneria paludicola RepID=UPI00029A084C
methionyl-tRNA formyltransferase
2019_SCN_bioreactor_t3_planktonic_scaffold_38712_5
Gimesia maris, Gimesia, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

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comp(2831..3418)
DNA (588bp) protein (196aa)
Peptide deformylase {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|RuleBase:RU003335}; Short=PDF {ECO:0000256|HAMAP-Rule:MF_00163};; EC=3.5.1.88 {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|SAAS:SAAS00013131};; Polypeptide deformylase {ECO:0000256|HAMAP-Rule:MF_00163}; TaxID=344747 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Gimesia.;" source="Gimesia maris DSM 8797.;"
peptide deformylase (EC:3.5.1.88)
peptide deformylase n=1 Tax=Schlesneria paludicola RepID=UPI00029B0B1F
2019_SCN_bioreactor_t3_planktonic_scaffold_38712_6
Planctopirus limnophila, Planctopirus, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

3699..5504
DNA (1806bp) protein (602aa)
ABC transporter ATP-binding protein n=1 Tax=Schlesneria paludicola RepID=UPI00029ABB4D
ABC transporter
ABC transporter related protein {ECO:0000313|EMBL:ADG67480.1}; TaxID=521674 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Planctopirus.;" source="Planctopirus limnophila (strain ATCC 43296 / DSM 3776 / IFAM 1008 /; 290) (Planctomyces limnophilus).;"
2019_SCN_bioreactor_t3_planktonic_scaffold_38712_7
Blastopirellula marina, Blastopirellula, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

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comp(5609..6034)
DNA (426bp) protein (142aa)
hypothetical protein n=1 Tax=Schlesneria paludicola RepID=UPI00029AA75A
UPF0102 protein DSM3645_06709 {ECO:0000256|HAMAP-Rule:MF_00048}; TaxID=314230 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Blastopirellula.;" source="Blastopirellula marina DSM 3645.;"
hypothetical protein
2019_SCN_bioreactor_t3_planktonic_scaffold_38712_8
Gimesia maris, Gimesia, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists


comp(6166..6582)
DNA (417bp) protein (139aa)
50S ribosomal protein L19 n=1 Tax=Schlesneria paludicola RepID=UPI00029B362D
50S ribosomal protein L19 {ECO:0000256|HAMAP-Rule:MF_00402, ECO:0000256|RuleBase:RU000559}; TaxID=344747 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Gimesia.;" source="Gimesia maris DSM 8797.;"
50S ribosomal protein L19
2019_SCN_bioreactor_t3_planktonic_scaffold_38712_9
Planctopirus limnophila, Planctopirus, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(6699..7379)
DNA (681bp) protein (227aa)
tRNA (guanine-N1)-methyltransferase (EC:2.1.1.31)
tRNA (guanine-N(1)-)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00605, ECO:0000256|RuleBase:RU003464}; EC=2.1.1.228 {ECO:0000256|HAMAP-Rule:MF_00605, ECO:0000256|RuleBase:RU003464};; M1G-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00605}; tRNA [GM37] methyltransferase {ECO:0000256|HAMAP-Rule:MF_00605}; TaxID=521674 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Planctopirus.;" source="Planctopirus limnophila (strain ATCC 43296 / DSM 3776 / IFAM 1008 /; 290) (Planctomyces limnophilus).;"
tRNA (guanine-N1)-methyltransferase n=1 Tax=Schlesneria paludicola RepID=UPI00029B2B51
2019_SCN_bioreactor_t3_planktonic_scaffold_38712_10
Planctopirus limnophila, Planctopirus, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists


comp(7529..7894)
DNA (366bp) protein (122aa)
30S ribosomal protein S16 n=1 Tax=Schlesneria paludicola RepID=UPI00029A0D7F
30S ribosomal protein S16
30S ribosomal protein S16 {ECO:0000256|HAMAP-Rule:MF_00385}; TaxID=521674 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Planctopirus.;" source="Planctopirus limnophila (strain ATCC 43296 / DSM 3776 / IFAM 1008 /; 290) (Planctomyces limnophilus).;"
2019_SCN_bioreactor_t3_planktonic_scaffold_38712_11
Planctopirus limnophila, Planctopirus, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists


comp(8011..9489)
DNA (1479bp) protein (493aa)
signal recognition particle n=1 Tax=Schlesneria paludicola RepID=UPI00029A2568
signal recognition particle protein
Signal recognition particle protein {ECO:0000256|HAMAP-Rule:MF_00306}; Fifty-four homolog {ECO:0000256|HAMAP-Rule:MF_00306}; TaxID=521674 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Planctopirus.;" source="Planctopirus limnophila (strain ATCC 43296 / DSM 3776 / IFAM 1008 /; 290) (Planctomyces limnophilus).;"
2019_SCN_bioreactor_t3_planktonic_scaffold_38712_12
Gimesia maris, Gimesia, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(9716..11263)
DNA (1548bp) protein (516aa)
integral membrane protein MviN n=1 Tax=Schlesneria paludicola RepID=UPI00029A1948
Putative lipid II flippase MurJ {ECO:0000256|PIRNR:PIRNR002869}; TaxID=344747 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Gimesia.;" source="Gimesia maris DSM 8797.;"
integral membrane protein MviN
Displaying 12 items

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