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2019_SCN_bioreactor_t3_planktonic_scaffold_38712_5

Organism: 2019_SCN_bioreactor_t3_planktonic_Planctomycetes_54_6

near complete RP 46 / 55 BSCG 44 / 51 MC: 2 ASCG 12 / 38 MC: 3
Location: comp(2831..3418)

Top 3 Functional Annotations

Value Algorithm Source
Peptide deformylase {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|RuleBase:RU003335}; Short=PDF {ECO:0000256|HAMAP-Rule:MF_00163};; EC=3.5.1.88 {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|SAAS:SAAS00013131};; Polypeptide deformylase {ECO:0000256|HAMAP-Rule:MF_00163}; TaxID=344747 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Gimesia.;" source="Gimesia maris DSM 8797.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 62.3
  • Coverage: 191.0
  • Bit_score: 252
  • Evalue 3.90e-64
peptide deformylase (EC:3.5.1.88) similarity KEGG
DB: KEGG
  • Identity: 61.4
  • Coverage: 189.0
  • Bit_score: 238
  • Evalue 9.00e-61
peptide deformylase n=1 Tax=Schlesneria paludicola RepID=UPI00029B0B1F similarity UNIREF
DB: UNIREF100
  • Identity: 95.9
  • Coverage: 194.0
  • Bit_score: 381
  • Evalue 3.00e-103

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Taxonomy

Gimesia maris → Gimesia → Planctomycetales → Planctomycetia → Planctomycetes → Bacteria

Sequences

DNA sequence
Length: 588
ATGCAAGTTCTGCCTTATTGTCATCCAGCTTTGCGCTGGAAATCGAAGCCAATCCTTGAGATCAACGATGACTTGAGGCGCATCGTCGCGGAAATGTTCAGCCTGATGTACGCCGCGAAGGGAATCGGCTTGGCCGCCAATCAAGTCGGGTTGCCGTACCGCCTGTTCGTCTTAAATTTGACAGCGGACCCTGCGGAAAAAGAAGAAGAAATCGTCTTCATTAACCCAGAGATCTTGAAGCGAAAGGGCACAACAGAAGGGGAGGAAGGTTGCTTGAGTTTCCCCGGAATGTATGGTCCCGTTAAACGTGCCGCGAAAGTAGTGATCGAGGCATTCGATCTGAACGGTGAATGCATCGAATACTCGCTCGATGATCTGGCAGCTCGAGCCGTGCAACACGAAACCGACCACTTGGATGGCGTTCTTTTCACCGACCGGATGACAGAGACTGCCCGACGAGAATTAGAACCTGTCATCAACGATTTCGAAGCACAGTTTCGCCGTTGGCAGTCTGAAGGACGATTTCCTTCCGACGAACTGATCAAACGCGAGCTGCTGCAACTTGAACCCAAGCCTCCCTCAACATAA
PROTEIN sequence
Length: 196
MQVLPYCHPALRWKSKPILEINDDLRRIVAEMFSLMYAAKGIGLAANQVGLPYRLFVLNLTADPAEKEEEIVFINPEILKRKGTTEGEEGCLSFPGMYGPVKRAAKVVIEAFDLNGECIEYSLDDLAARAVQHETDHLDGVLFTDRMTETARRELEPVINDFEAQFRRWQSEGRFPSDELIKRELLQLEPKPPST*