ggKbase home page

2019_SCN_bioreactor_t3_planktonic_scaffold_45450_1

Organism: 2019_SCN_bioreactor_t3_planktonic_Planctomycetes_54_6

near complete RP 46 / 55 BSCG 44 / 51 MC: 2 ASCG 12 / 38 MC: 3
Location: 1..318

Top 3 Functional Annotations

Value Algorithm Source
3-phosphoshikimate 1-carboxyvinyltransferase (EC:2.5.1.19) similarity KEGG
DB: KEGG
  • Identity: 71.3
  • Coverage: 101.0
  • Bit_score: 157
  • Evalue 1.10e-36
3-phosphoshikimate 1-carboxyvinyltransferase {ECO:0000256|HAMAP-Rule:MF_00210, ECO:0000256|RuleBase:RU000531}; EC=2.5.1.19 {ECO:0000256|HAMAP-Rule:MF_00210, ECO:0000256|RuleBase:RU000531};; 5-enolpyruvylshikimate-3-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00210}; TaxID=756272 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Rubinisphaera.;" source="Rubinisphaera brasiliensis (strain ATCC 49424 / DSM 5305 / JCM 21570 /; NBRC 103401 / IFAM 1448) (Planctomyces brasiliensis).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 71.3
  • Coverage: 101.0
  • Bit_score: 157
  • Evalue 5.40e-36
3-phosphoshikimate 1-carboxyvinyltransferase n=1 Tax=Schlesneria paludicola RepID=UPI00029A79BE similarity UNIREF
DB: UNIREF100
  • Identity: 96.2
  • Coverage: 105.0
  • Bit_score: 212
  • Evalue 1.70e-52

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Rubinisphaera brasiliensis → Rubinisphaera → Planctomycetales → Planctomycetia → Planctomycetes → Bacteria

Sequences

DNA sequence
Length: 318
CCATTCGCAAACGGTCCGACTCGGATTCGAAACGTCGCACACATGCGACTGAAAGAGACAGATCGAGTCACTGCCGTCGTGAACGAATTGCGCGGACTTGGCCTGCAAGTCGAAGAGCATGAGGATGGGATGACAATCCATCCCGGCGCTCTGCACGGTGGTACCGTGGCGACCTACGACGATCACCGAATGGCGATGAGTTTTTCGTTGATCGGGTTACGCGTTCCTGGCGTGAAAATCGCCGATCCTGAGTGCACGTCGAAAACGTACCCGGAATACTTCGACGACCTGGATCGTCTGTGTGCGGGGTCGCGTTGA
PROTEIN sequence
Length: 106
PFANGPTRIRNVAHMRLKETDRVTAVVNELRGLGLQVEEHEDGMTIHPGALHGGTVATYDDHRMAMSFSLIGLRVPGVKIADPECTSKTYPEYFDDLDRLCAGSR*