ggKbase home page

2019_SCN_bioreactor_t3_planktonic_scaffold_45450

Search features with annotation key words

Displaying 6 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
2019_SCN_bioreactor_t3_planktonic_scaffold_45450_1
Rubinisphaera brasiliensis, Rubinisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

1..318
DNA (318bp) protein (106aa)
3-phosphoshikimate 1-carboxyvinyltransferase (EC:2.5.1.19)
3-phosphoshikimate 1-carboxyvinyltransferase {ECO:0000256|HAMAP-Rule:MF_00210, ECO:0000256|RuleBase:RU000531}; EC=2.5.1.19 {ECO:0000256|HAMAP-Rule:MF_00210, ECO:0000256|RuleBase:RU000531};; 5-enolpyruvylshikimate-3-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00210}; TaxID=756272 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Rubinisphaera.;" source="Rubinisphaera brasiliensis (strain ATCC 49424 / DSM 5305 / JCM 21570 /; NBRC 103401 / IFAM 1448) (Planctomyces brasiliensis).;"
3-phosphoshikimate 1-carboxyvinyltransferase n=1 Tax=Schlesneria paludicola RepID=UPI00029A79BE
2019_SCN_bioreactor_t3_planktonic_scaffold_45450_2
Planctopirus limnophila, Planctopirus, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(577..1893)
DNA (1317bp) protein (439aa)
phosphonopyruvate decarboxylase-like protein (EC:5.4.2.1)
phosphoglycerate mutase n=1 Tax=Schlesneria paludicola RepID=UPI00029B570D
Phosphonopyruvate decarboxylase-related protein {ECO:0000313|EMBL:ADG66618.1}; TaxID=521674 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Planctopirus.;" source="Planctopirus limnophila (strain ATCC 43296 / DSM 3776 / IFAM 1008 /; 290) (Planctomyces limnophilus).;"
2019_SCN_bioreactor_t3_planktonic_scaffold_45450_3
Planctopirus limnophila, Planctopirus, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

2182..5727
DNA (3546bp) protein (1182aa)
DNA-directed DNA polymerase {ECO:0000256|SAAS:SAAS00057170}; EC=2.7.7.7 {ECO:0000256|SAAS:SAAS00057170};; TaxID=521674 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Planctopirus.;" source="Planctopirus limnophila (strain ATCC 43296 / DSM 3776 / IFAM 1008 /; 290) (Planctomyces limnophilus).;"
DNA polymerase III subunit alpha (EC:2.7.7.7)
DNA polymerase III subunit alpha n=1 Tax=Schlesneria paludicola RepID=UPI00029AE03C
2019_SCN_bioreactor_t3_planktonic_scaffold_45450_4
Planctopirus limnophila, Planctopirus, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

6010..7185
DNA (1176bp) protein (392aa)
lipid-A-disaccharide synthase (EC:2.4.1.182)
Lipid-A-disaccharide synthase {ECO:0000313|EMBL:ADG66787.1}; EC=2.4.1.182 {ECO:0000313|EMBL:ADG66787.1};; TaxID=521674 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Planctopirus.;" source="Planctopirus limnophila (strain ATCC 43296 / DSM 3776 / IFAM 1008 /; 290) (Planctomyces limnophilus).;"
lipid-A-disaccharide synthase n=1 Tax=Schlesneria paludicola RepID=UPI00029A03CD
2019_SCN_bioreactor_t3_planktonic_scaffold_45450_5
RLO_PLX_64_10, Bacteria

Not on your lists

comp(7462..8895)
DNA (1434bp) protein (478aa)
PLP-dependent enzyme, glutamate decarboxylase n=1 Tax=Schlesneria paludicola RepID=UPI00029A5B5D
pyridoxal-dependent decarboxylase domain-containing protein
Tax=RIFCSPLOWO2_12_FULL_PLX_64_10_curated
2019_SCN_bioreactor_t3_planktonic_scaffold_45450_6
Rhodopirellula baltica, Rhodopirellula, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(9277..9735)
DNA (459bp) protein (153aa)
RNA polymerase sigma-H factor n=1 Tax=Schlesneria paludicola RepID=UPI00029B0AAB
hypothetical protein
RNA polymerase sigma-H factor {ECO:0000313|EMBL:CAD73620.1}; TaxID=243090 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Rhodopirellula.;" source="Rhodopirellula baltica (strain SH1).;"
Displaying 6 items

View Taxonomy