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2019_SCN_bioreactor_t3_planktonic_scaffold_45450_6

Organism: 2019_SCN_bioreactor_t3_planktonic_Planctomycetes_54_6

near complete RP 46 / 55 BSCG 44 / 51 MC: 2 ASCG 12 / 38 MC: 3
Location: comp(9277..9735)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma-H factor n=1 Tax=Schlesneria paludicola RepID=UPI00029B0AAB similarity UNIREF
DB: UNIREF100
  • Identity: 79.9
  • Coverage: 154.0
  • Bit_score: 243
  • Evalue 1.30e-61
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 27.6
  • Coverage: 145.0
  • Bit_score: 75
  • Evalue 1.00e-11
RNA polymerase sigma-H factor {ECO:0000313|EMBL:CAD73620.1}; TaxID=243090 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Rhodopirellula.;" source="Rhodopirellula baltica (strain SH1).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 32.4
  • Coverage: 139.0
  • Bit_score: 70
  • Evalue 1.20e-09

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Taxonomy

Rhodopirellula baltica → Rhodopirellula → Planctomycetales → Planctomycetia → Planctomycetes → Bacteria

Sequences

DNA sequence
Length: 459
CTCGACGAAAATGGCACCTCCACCGACACTCCTGTCAGTTTGAAGGTCGATGATATTCCGTTGAAAAACACCCTGCGGCTGATGTTAGATCCCCTGCAACTGGACTACGTCCTCGAAAACGATCAATTGATCATTACCACCCAAACTCGCGCTCAGAATACATTCGAAACACGTGTGTATTTCGAGACTCCATTGAATCGCTCAACAAGCTCCAATGGCCCTCTTCTCAAGCAATTGGTTGAAGTCATCCCCAAGTCCGTTCAGCCCGATTCCTGGGCACCTCAAAAGGATGGAGATCGGGCGGGAGGTGACGGAACGATTAGCCTGTTCGAACAAAAATTGATCATCCGTCAGACCCAACGGATTCACGAGGAAATCAATGAGTTCCTGGACGAACTCTTGGGCGAGCAGCGAACAGACCCAACCAAACCTGAAGCGAAGTCGAATCCGGGCTTTTGA
PROTEIN sequence
Length: 153
LDENGTSTDTPVSLKVDDIPLKNTLRLMLDPLQLDYVLENDQLIITTQTRAQNTFETRVYFETPLNRSTSSNGPLLKQLVEVIPKSVQPDSWAPQKDGDRAGGDGTISLFEQKLIIRQTQRIHEEINEFLDELLGEQRTDPTKPEAKSNPGF*