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2019_SCN_bioreactor_t3_planktonic_scaffold_52978_3

Organism: 2019_SCN_bioreactor_t3_planktonic_Planctomycetes_54_6

near complete RP 46 / 55 BSCG 44 / 51 MC: 2 ASCG 12 / 38 MC: 3
Location: comp(2776..3300)

Top 3 Functional Annotations

Value Algorithm Source
signal peptide n=1 Tax=Schlesneria paludicola RepID=UPI00029A5904 similarity UNIREF
DB: UNIREF100
  • Identity: 79.1
  • Coverage: 177.0
  • Bit_score: 284
  • Evalue 4.50e-74
Membrane protein containing DUF1550 {ECO:0000313|EMBL:EMI27854.1}; TaxID=1263868 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Rhodopirellula.;" source="Rhodopirellula europaea SH398.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 37.1
  • Coverage: 175.0
  • Bit_score: 107
  • Evalue 1.40e-20
signal peptide similarity KEGG
DB: KEGG
  • Identity: 37.7
  • Coverage: 175.0
  • Bit_score: 106
  • Evalue 4.70e-21

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Taxonomy

Rhodopirellula europaea → Rhodopirellula → Planctomycetales → Planctomycetia → Planctomycetes → Bacteria

Sequences

DNA sequence
Length: 525
ATGTCGTTTCTCAATGCTGCGTTCCTCTGGGGGTTGCCGCTGCTGGCTGTGCCAGTAGCAATCCACCTGCTTAGCCGCCGCCGACAGGAGGTCGTGAAGTGGGGTGCGATGCAATTCCTCATGGACAGCAGCATTCGGCGACGCAAGATCTGGCGATGGGACGACCTGCTTCTCATGCTGATCCGGACCTTGGTGGTGTTGGGAATCGTCATGGCATTGGCCCGGCCACTCTGGCTTGGAGCTGGTATTGGAAACGGATTGGGACGTGACGTCATCTTTATCTGGGATGTTTCACTTTCGATGCACCGCGAGGATGAGAGTGGCCGTAGTTCGTTTGACAGGCTTCTCGAGAAGACAAGTGATCTGATGGGACACCTGGCGGATGGCGACACGATTCGTGGAATGATCACGGTCGGACGCGGCAGGTGGCTGACAAGTGAGCCCTTAGCGGCAACCGCCGATTTGAAGTACACAACGTCATTGGGGTCGCTGCGACATCGCACAATCTGGCTGTCGATACACTGA
PROTEIN sequence
Length: 175
MSFLNAAFLWGLPLLAVPVAIHLLSRRRQEVVKWGAMQFLMDSSIRRRKIWRWDDLLLMLIRTLVVLGIVMALARPLWLGAGIGNGLGRDVIFIWDVSLSMHREDESGRSSFDRLLEKTSDLMGHLADGDTIRGMITVGRGRWLTSEPLAATADLKYTTSLGSLRHRTIWLSIH*