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2019_SCN_bioreactor_t3_planktonic_scaffold_52978

Search features with annotation key words

Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
2019_SCN_bioreactor_t3_planktonic_scaffold_52978_1
Rhodopirellula maiorica, Rhodopirellula, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

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comp(2..1249)
DNA (1248bp) protein (416aa)
signal peptide n=1 Tax=Schlesneria paludicola RepID=UPI00029B0D04
Membrane protein containing DUF1355 {ECO:0000313|EMBL:EMI17561.1}; TaxID=1265738 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Rhodopirellula.;" source="Rhodopirellula maiorica SM1.;"
2019_SCN_bioreactor_t3_planktonic_scaffold_52978_2
Rhodopirellula maiorica, Rhodopirellula, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(1253..2566)
DNA (1314bp) protein (438aa)
signal peptide n=1 Tax=Schlesneria paludicola RepID=UPI00029A5904
Signal peptide protein {ECO:0000313|EMBL:EMI17560.1}; TaxID=1265738 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Rhodopirellula.;" source="Rhodopirellula maiorica SM1.;"
signal peptide
2019_SCN_bioreactor_t3_planktonic_scaffold_52978_3
Rhodopirellula europaea, Rhodopirellula, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

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comp(2776..3300)
DNA (525bp) protein (175aa)
signal peptide n=1 Tax=Schlesneria paludicola RepID=UPI00029A5904
Membrane protein containing DUF1550 {ECO:0000313|EMBL:EMI27854.1}; TaxID=1263868 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Rhodopirellula.;" source="Rhodopirellula europaea SH398.;"
signal peptide
2019_SCN_bioreactor_t3_planktonic_scaffold_52978_4
Rhodopirellula maiorica, Rhodopirellula, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(3357..4268)
DNA (912bp) protein (304aa)
hypothetical protein n=1 Tax=Schlesneria paludicola RepID=UPI00029B4B40
Uncharacterized protein {ECO:0000313|EMBL:EMI18414.1}; TaxID=1265738 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Rhodopirellula.;" source="Rhodopirellula maiorica SM1.;"
hypothetical protein
2019_SCN_bioreactor_t3_planktonic_scaffold_52978_5
Rhodopirellula maiorica, Rhodopirellula, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(4320..5384)
DNA (1065bp) protein (355aa)
ATPase AAA n=1 Tax=Schlesneria paludicola RepID=UPI00029AA9C5
ATPase chaperone, AAA-type, MoxR, predicted {ECO:0000313|EMBL:EMI18415.1}; TaxID=1265738 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Rhodopirellula.;" source="Rhodopirellula maiorica SM1.;"
regulatory protein
2019_SCN_bioreactor_t3_planktonic_scaffold_52978_6

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comp(5431..6612)
DNA (1182bp) protein (394aa)
signal peptide n=1 Tax=Schlesneria paludicola RepID=UPI00029ADB0B
Uncharacterized protein {ECO:0000313|EMBL:KKL52312.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
signal peptide
2019_SCN_bioreactor_t3_planktonic_scaffold_52978_7
Blastopirellula marina, Blastopirellula, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

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comp(6982..8106)
DNA (1125bp) protein (375aa)
hypothetical protein n=1 Tax=Schlesneria paludicola RepID=UPI00029B3BB3
Probable fimbrial protein {ECO:0000313|EMBL:EAQ81828.1}; TaxID=314230 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Blastopirellula.;" source="Blastopirellula marina DSM 3645.;"
prepilin-type N-terminal cleavage/methylation domain-containing protein
2019_SCN_bioreactor_t3_planktonic_scaffold_52978_8
unknown

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9356..9826
DNA (471bp) protein (157aa)

This feature has no annotations

2019_SCN_bioreactor_t3_planktonic_scaffold_52978_9
unknown

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comp(10227..10616)
DNA (390bp) protein (130aa)
hypothetical protein n=1 Tax=Schlesneria paludicola RepID=UPI00029A0F74
2019_SCN_bioreactor_t3_planktonic_scaffold_52978_10
unknown

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comp(10675..10884)
DNA (210bp) protein (70aa)

This feature has no annotations

2019_SCN_bioreactor_t3_planktonic_scaffold_52978_11
Rubinisphaera brasiliensis, Rubinisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(10949..12319)
DNA (1371bp) protein (457aa)
chemotaxis protein CheY n=1 Tax=Schlesneria paludicola RepID=UPI00029A15B6
Fis family transcriptionel regulator
Two component, sigma54 specific, transcriptional regulator, Fis family {ECO:0000313|EMBL:ADY60668.1}; TaxID=756272 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Rubinisphaera.;" source="Rubinisphaera brasiliensis (strain ATCC 49424 / DSM 5305 / JCM 21570 /; NBRC 103401 / IFAM 1448) (Planctomyces brasiliensis).;"
2019_SCN_bioreactor_t3_planktonic_scaffold_52978_12
Gimesia maris, Gimesia, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(12312..13598)
DNA (1287bp) protein (429aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=344747 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Gimesia.;" source="Gimesia maris DSM 8797.;"
PAS/PAC sensor signal transduction histidine kinase n=1 Tax=Schlesneria paludicola RepID=UPI00029A7C6A
PAS/PAC sensor signal transduction histidine kinase
2019_SCN_bioreactor_t3_planktonic_scaffold_52978_13
RIFOXYB12_FULL_Lentisphaerae_65_16_curated, Lentisphaerae, Bacteria

Not on your lists

14025..14762
DNA (738bp) protein (246aa)
RNA polymerase subunit sigma-24 n=1 Tax=Schlesneria paludicola RepID=UPI00029A77F8
RNA polymerase sigma-70 factor
Tax=RIFOXYB12_FULL_Lentisphaerae_65_16_curated
2019_SCN_bioreactor_t3_planktonic_scaffold_52978_14
RBG_16_Planctomycetes_64_12_curated, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

14822..15694
DNA (873bp) protein (291aa)
pknB; serine/threonine kinase Pkn10 (EC:2.7.1.-)
Serine/threonine protein kinase n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XQ23_9BACT
Tax=RBG_16_Planctomycetes_64_12_curated
Displaying 14 items

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