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2019_SCN_bioreactor_t3_planktonic_scaffold_52978_11

Organism: 2019_SCN_bioreactor_t3_planktonic_Planctomycetes_54_6

near complete RP 46 / 55 BSCG 44 / 51 MC: 2 ASCG 12 / 38 MC: 3
Location: comp(10949..12319)

Top 3 Functional Annotations

Value Algorithm Source
chemotaxis protein CheY n=1 Tax=Schlesneria paludicola RepID=UPI00029A15B6 similarity UNIREF
DB: UNIREF100
  • Identity: 86.2
  • Coverage: 456.0
  • Bit_score: 747
  • Evalue 4.90e-213
Fis family transcriptionel regulator similarity KEGG
DB: KEGG
  • Identity: 55.4
  • Coverage: 462.0
  • Bit_score: 483
  • Evalue 4.90e-134
Two component, sigma54 specific, transcriptional regulator, Fis family {ECO:0000313|EMBL:ADY60668.1}; TaxID=756272 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Rubinisphaera.;" source="Rubinisphaera brasiliensis (strain ATCC 49424 / DSM 5305 / JCM 21570 /; NBRC 103401 / IFAM 1448) (Planctomyces brasiliensis).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 55.4
  • Coverage: 462.0
  • Bit_score: 483
  • Evalue 2.40e-133

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Taxonomy

Rubinisphaera brasiliensis → Rubinisphaera → Planctomycetales → Planctomycetia → Planctomycetes → Bacteria

Sequences

DNA sequence
Length: 1371
GTGACTGACGAACGATTGAACCGGATTCTACTTGCCGACGATGAACCACTCTACCTGCGAACGACAGCGGAACTACTCCGTCGCGCCGGATTCGAATGCCTCACTGCGGTTGACGCAGAAGGTGCGCTCTCGTTGCTGTCCGCGGGCGGAATCGATCTGATGATTGTTGATTTGAACATGCCGGGAAATCTCGACCTGGAACTGCTCAATATTGGACGAAGAGACTACCCCGAGGTTCCGATGATCGTTGTGACGGGGGCACCGTCGCTCCACAGTGCCATTGACAGCGTGAAGCTGCGAATCTCGGACTATTTGCTGAAACCGGTCAAATTTGAAGACCTCGTTGCGAGTGTTCGCCGGGCGTTGTCGCATCGCGGCGAAGTAATTGATTCTGCACTACCTAATAATTCAACATTGCTTCTCGGCGAGTCCACGACGATTGGTGAGATTCACGACCTTATCCGACGCGTCGCCATGACGGATGCCAGTGTGCTCATTACAGGCGAGAGTGGCACGGGCAAGGAATTGGCCGCACAATCTTTGCACCGACTGAGTCGAAGATGTCAGCACCGATTCGCGACAATCGACTGCACTGCGATTCCCGAATCGCTTTTTGAATCGGTGCTGTTTGGTCATACAAAAGGATCTTTTACGGGGGCGACCAGTGATCAACCCGGGCTGTTAAAGGAAGCTGACGGGGGAACCATTTTCCTCGACGAAATCGGTGAGCTGTCGTTGCCGCTGCAGGCCAAATTGCTGAGAGTGATCCAACATTCGACATTCACGCCCGTTGGTCAAACGCGCCCGATGACAATCAACGTGCGTTTCGTTGCTGCCACGAACCGAGATCTGGAGGAAGAAGTTCGCCGGGAACGGTTCAGGCGCGATCTGTTTTATCGGCTTGCTGTTGTTCCGATCTCGTTACCACCACTTCGTGATCGAGGTAACGATGTCATGCTTCTGGCACATCATTTCCTTCGCCAATTGTCAGTCGGTGCCGCCCCCCATTTGCTCGAGTTCTCCCCCGAAGCGACAGCGTGCCTGCAGTCATATGCATGGCCAGGTAATGTACGCGAACTGCGAAATGTGATTGAACGTGCTGTCGTGCTCGCGCGCGGCCGCGTCATTGAGCTTTCTGATCTGCCGACAGGACTCGCTGCATCAGACCAGCCAGGCGGGCTTCTTGGTGAAGGTGCCAACTCACGAGGTCGAGCACTTTCGCAAGCGGATCGGACCTACATCGAAGAACTGTTGCGAGATTCCGGCGGAAATGTCAGCCGTGCTGCTGCAGTGGCCGGGTTAACGCGACAAGGTTTGTACAAGCTTCTTCAGAAGCATGGCCTGCCGCCAGCTCGATTCCGTGAGTCATAG
PROTEIN sequence
Length: 457
VTDERLNRILLADDEPLYLRTTAELLRRAGFECLTAVDAEGALSLLSAGGIDLMIVDLNMPGNLDLELLNIGRRDYPEVPMIVVTGAPSLHSAIDSVKLRISDYLLKPVKFEDLVASVRRALSHRGEVIDSALPNNSTLLLGESTTIGEIHDLIRRVAMTDASVLITGESGTGKELAAQSLHRLSRRCQHRFATIDCTAIPESLFESVLFGHTKGSFTGATSDQPGLLKEADGGTIFLDEIGELSLPLQAKLLRVIQHSTFTPVGQTRPMTINVRFVAATNRDLEEEVRRERFRRDLFYRLAVVPISLPPLRDRGNDVMLLAHHFLRQLSVGAAPHLLEFSPEATACLQSYAWPGNVRELRNVIERAVVLARGRVIELSDLPTGLAASDQPGGLLGEGANSRGRALSQADRTYIEELLRDSGGNVSRAAAVAGLTRQGLYKLLQKHGLPPARFRES*