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2019_SCN_bioreactor_t3_planktonic_scaffold_52978_13

Organism: 2019_SCN_bioreactor_t3_planktonic_Planctomycetes_54_6

near complete RP 46 / 55 BSCG 44 / 51 MC: 2 ASCG 12 / 38 MC: 3
Location: 14025..14762

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase subunit sigma-24 n=1 Tax=Schlesneria paludicola RepID=UPI00029A77F8 similarity UNIREF
DB: UNIREF100
  • Identity: 45.8
  • Coverage: 251.0
  • Bit_score: 220
  • Evalue 1.50e-54
RNA polymerase sigma-70 factor similarity KEGG
DB: KEGG
  • Identity: 46.3
  • Coverage: 244.0
  • Bit_score: 198
  • Evalue 1.70e-48
Tax=RIFOXYB12_FULL_Lentisphaerae_65_16_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 49.8
  • Coverage: 251.0
  • Bit_score: 231
  • Evalue 8.90e-58

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Taxonomy

RIFOXYB12_FULL_Lentisphaerae_65_16_curated → Lentisphaerae → Bacteria

Sequences

DNA sequence
Length: 738
ATGCCGTCATCGAGTCCATTGTCTGCCGCATCCCCTTCACAGTTTGCTGCGACTCGATGGAGCGTCGTTCTGGCTGCAGATAACTGGCGAACTTGCCCAACTGCAAAATCCGCGATGGGCGAGCTGGCAGAATTGTATTGGTTCCCCCTCTACGCCTATCTCAGGCGGCAAGGGAACGCACCTGATCTTGCCGAGGATTTAGTTCAAGGTTTTCTCGTCCACCTACTTGAGCACGGTGCTCTACACGCCCTCGACAGATCCAAAGGTCGATTCCGTTCATTTCTTCTCGCGTCATTGAAAAACTTCGTCTGCAACGAATGGGACAAAAGTCGGGCAATGAAGCGTGGCGGTGGTATCTCATTGATCTCACTCGACGTTGTCGATGCGGAAACTCGATATCAAATCGAACCGGTTGACCTGCTGACGCCGGATCGAGTTTTTGACCGACGATGGGCCCTGGAACTGCTCGATCGTGTGTTGATACGGCTGAGAGACCAGTACGTCCAGCAGGGGCTTTCTGAGCTTTTTGAAGCCCTGGAAGGAAATTTGGTTCGGCTTGAACCGGCGCAACATGCACAGGTCGCTCAACGACTCGGAATCACAGAGGGAGCCGTCAAAGTTGCGGCGCATCGGCTTCGACAACGTTACCGAAAGGCATTGCGCGATGAGATCTCTCACACGGTTTCCACACCAGAGCTCGTCGATCAGGAAATCCAAGAATTATTGAAATGCCTGTAA
PROTEIN sequence
Length: 246
MPSSSPLSAASPSQFAATRWSVVLAADNWRTCPTAKSAMGELAELYWFPLYAYLRRQGNAPDLAEDLVQGFLVHLLEHGALHALDRSKGRFRSFLLASLKNFVCNEWDKSRAMKRGGGISLISLDVVDAETRYQIEPVDLLTPDRVFDRRWALELLDRVLIRLRDQYVQQGLSELFEALEGNLVRLEPAQHAQVAQRLGITEGAVKVAAHRLRQRYRKALRDEISHTVSTPELVDQEIQELLKCL*