ggKbase home page

2019_SCN_bioreactor_t3_planktonic_scaffold_61532_7

Organism: 2019_SCN_bioreactor_t3_planktonic_Planctomycetes_54_6

near complete RP 46 / 55 BSCG 44 / 51 MC: 2 ASCG 12 / 38 MC: 3
Location: comp(9941..10555)

Top 3 Functional Annotations

Value Algorithm Source
sigma-70 family RNA polymerase sigma factor n=1 Tax=Schlesneria paludicola RepID=UPI00029A4848 similarity UNIREF
DB: UNIREF100
  • Identity: 84.8
  • Coverage: 204.0
  • Bit_score: 364
  • Evalue 6.80e-98
sigma-70 family RNA polymerase sigma factor similarity KEGG
DB: KEGG
  • Identity: 45.4
  • Coverage: 196.0
  • Bit_score: 181
  • Evalue 1.80e-43
RNA polymerase sigma factor, sigma-70 family {ECO:0000313|EMBL:AGA27495.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 45.4
  • Coverage: 196.0
  • Bit_score: 181
  • Evalue 8.80e-43

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Singulisphaera acidiphila → Singulisphaera → Planctomycetales → Planctomycetia → Planctomycetes → Bacteria

Sequences

DNA sequence
Length: 615
ATGATCGAACCGCTGACACGAGCGAGTCTGATGTTGCGTTTGCGAGATCCCCAAGATCAGCAAGCGTGGACTCAGTTTGTGTCAATATACGAACCATTGATCTTACGTTTGTTGCGTCAACATGGATTGCAAGAAGCTGATGCCCGTGACGTCTCGCAGCAGGTTGTGCTGGCCGTGATGCAGGCCGTTGATCGCTGGCGACCGGATGGCCGTGATGCATCGTTCCGTCGTTGGTTGTTCGGAATTGCTCGGAAAATGTCGCTCAAATTTCTCCAACGTGGTGCCAAGGTCAGTGGGCCTGCGCGGCGTGGCGTAGGAGGAACGGAAATCCAGGACTTATTACAGAGTCTGCCCGAACCGGATCATCGTACGATCACAGAGTTCGACGAAGAATATCGCAATGAGATTTTTGAATGGGCGGCAGAACAAGTGCGGCGTGAGTTTCGTGAATCGACGTGGCAGGCGTTCTGGCGAAGCTGCGTTTTACATGAGCCTATTGCGCACGTGTCAGAGCAGTTGGGGATGACGACGGGCAGTGTGTATGTCGCAAGGACTCGCGTGATTGCGCGGCTTCGAAAACTTGTGGAAGACTGCGAGGCCACTCATGACGGCTGA
PROTEIN sequence
Length: 205
MIEPLTRASLMLRLRDPQDQQAWTQFVSIYEPLILRLLRQHGLQEADARDVSQQVVLAVMQAVDRWRPDGRDASFRRWLFGIARKMSLKFLQRGAKVSGPARRGVGGTEIQDLLQSLPEPDHRTITEFDEEYRNEIFEWAAEQVRREFRESTWQAFWRSCVLHEPIAHVSEQLGMTTGSVYVARTRVIARLRKLVEDCEATHDG*