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2019_SCN_bioreactor_t3_planktonic_scaffold_61532_8

Organism: 2019_SCN_bioreactor_t3_planktonic_Planctomycetes_54_6

near complete RP 46 / 55 BSCG 44 / 51 MC: 2 ASCG 12 / 38 MC: 3
Location: 11031..13076

Top 3 Functional Annotations

Value Algorithm Source
Transcription-repair-coupling factor {ECO:0000256|HAMAP-Rule:MF_00969}; Short=TRCF {ECO:0000256|HAMAP-Rule:MF_00969};; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_00969};; TaxID=344747 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Gimesia.;" source="Gimesia maris DSM 8797.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 42.6
  • Coverage: 399.0
  • Bit_score: 335
  • Evalue 9.30e-89
helicase n=1 Tax=Schlesneria paludicola RepID=UPI000299F58A similarity UNIREF
DB: UNIREF100
  • Identity: 83.6
  • Coverage: 660.0
  • Bit_score: 1077
  • Evalue 0.0
transcription-repair coupling factor similarity KEGG
DB: KEGG
  • Identity: 45.8
  • Coverage: 380.0
  • Bit_score: 328
  • Evalue 3.90e-87

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Taxonomy

Gimesia maris → Gimesia → Planctomycetales → Planctomycetia → Planctomycetes → Bacteria

Sequences

DNA sequence
Length: 2046
ATGGCAGGAATCGCAGAGAACCCCATCTCACAATTGACCGAATTGCCCGCTCGCTTGCTCGCACAGCCGGGTATGACCGAAGTCGTCAATCTCCTTGATCGGGGAAAAGAAGCCACGATCGATGGGGCGTGGGGATCGACGACGGCGCTTGCCGCAGTCACGCTCAGCGAAAAGGCCCCCGGCAGTCTGCTCGTCGTCCTTCCGCACGAAAAAGATGTCGACGGCTTCAAAGCCGATGTGGCGGCATTCGGTACCACGCCGCAACTCTTTCCCTCCTGGGCCGCCATCCCCAAAGAACTGAGCATCATCGATCCGATTCTCGCGAGTCGGCTACGGACGTTGCGCGCCTTGGAATCGGCGGTGCCGCCGAAACTGGTCATCACGACCATTCACGCACTCCTGCAACCTGTTCCCAGCCGTTCTGACCGAACCGTGGCATCCCGCGCAATGCGCGTGGGCGACGAGTTAAATCTTGACGAATTGATCGCGTGGTTGATCGAGCGCGGGTTCGAGCGAGTTACCGCCATCGAGTTGCCCGGTGAATTCTGCATTCACGGCGGGATCGTCGATATCTTCTCACCGGATATGAGCGCCCCTGTCCGGATTGAACTTTTTGGGGACGAGATTGAGTCGATTCGATTGTTCGACGTGGAAACCCAACTAAAAGTGGGCGATCTGCAGGAAATCGACATCACGATCGTGGCACCGCAGACAACAGAAGAGACCGAGGATCCCGAAAATCCCGCCCCCTCCGATGCATCACGCAACGCAGCACAAACCGTCCTCAATGCGTCGGCATTGGAATCGCTTCCCGCAAACTCTTGGGTTGTCTTCGTCCAACTCAGTGAAATTGTCGGAGAAGGGAAACGGTACCTCGATCGTCTCGCTGATCCTCGAGGTCTTCTCAGCGTCGAATCCACGCTTGAGCGTTGCTCGCGGCATCCGCATGTGACGATCGCCCCCTTGCTCGCGGACGCTCAACAGCCTACATGCCATCTTCAGGTAGAATCGATCGAGCGTTTCGGAGGCCCTAAGAGCGAAGCACTGCCGGAACTTGCGAAAGTCGTTCAGCAAGACGAGATGGTTTTGATCGCATGCCACAATGAGGCGGCACGCATGCGACTGGCCGAACTTCTAACGGAAGTCTTCCTCGGCGGGGAAAAGAAAGGGAAATCTCCCGAAGAACAAGGTGCCTTTAAATCCAAGAAGGCGATCAGCGCCACAAACGATGAAACACCGGCGGCGCCAAAGAAGCCTGCCAAAAAAGATGCGCCAATTCCTCCCATGAACCCGGCGAATAGTCGTCCGACAATGAGCGCTAATACCGGGGGTGGACTGAAACGGTTCCTGCGCGGCCCCGCCAAAGATGCGGTAAAAGCCGAAGAACAAGACACAACAGAAGCCAAAGCAAGTATGTCCAACGACGCGCCCGCAGCGCCGGCGTCGCAGCTTCAGGCCGTTTCATCCGATGATCCAGTCAAGACGCATCCGTTCCTTTCACGCATCCGGCTGTGCATTGGGCACGTCGCGCAGGGCTTCCGACTCCGAAACGAAAAGCTTGTTGTCCTCAGTGACAATGAACTCTTCGGGCGCACCGAGGTCCAACGACCAACTCGACGAAGCAAGATCGAATCACGGGCCATCGACAGCTTCCTCGATCTCAACCCGGGCGATCTCGTCGTACATCTGTCTCACGGAATCGCCCGGTTTCGCGGGATGGAAGTTCAGCAAAAAGGAGAACATACCGAAGACCATCTCGCACTCGAATTCGGCGGCGGGATCAAGGTTTATGTCCCGGTTTCATTGATTCACCTTGTTCAGAAGTACGTCGGGGGCGGCAAATCGTCACCCGAACTTTCCAAGCTGGGCGGCACGACCTGGGCCAACAAGAAGAAACGCGTCACCGAAGCCGTCTGCGACATGGCTTCGGACATGATCAAGCTTCAGGACTGGTGTGTCCACCTGATAGTCATTGGGTCCAGGAATTCGACGCCGCGTTTCCTTACACGGAAACCGACGATCAACTGCGGGCCATCACGGAACTGA
PROTEIN sequence
Length: 682
MAGIAENPISQLTELPARLLAQPGMTEVVNLLDRGKEATIDGAWGSTTALAAVTLSEKAPGSLLVVLPHEKDVDGFKADVAAFGTTPQLFPSWAAIPKELSIIDPILASRLRTLRALESAVPPKLVITTIHALLQPVPSRSDRTVASRAMRVGDELNLDELIAWLIERGFERVTAIELPGEFCIHGGIVDIFSPDMSAPVRIELFGDEIESIRLFDVETQLKVGDLQEIDITIVAPQTTEETEDPENPAPSDASRNAAQTVLNASALESLPANSWVVFVQLSEIVGEGKRYLDRLADPRGLLSVESTLERCSRHPHVTIAPLLADAQQPTCHLQVESIERFGGPKSEALPELAKVVQQDEMVLIACHNEAARMRLAELLTEVFLGGEKKGKSPEEQGAFKSKKAISATNDETPAAPKKPAKKDAPIPPMNPANSRPTMSANTGGGLKRFLRGPAKDAVKAEEQDTTEAKASMSNDAPAAPASQLQAVSSDDPVKTHPFLSRIRLCIGHVAQGFRLRNEKLVVLSDNELFGRTEVQRPTRRSKIESRAIDSFLDLNPGDLVVHLSHGIARFRGMEVQQKGEHTEDHLALEFGGGIKVYVPVSLIHLVQKYVGGGKSSPELSKLGGTTWANKKKRVTEAVCDMASDMIKLQDWCVHLIVIGSRNSTPRFLTRKPTINCGPSRN*